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MIMS Environmental/Metagenome sample from gut metagenome

Identifiers
BioSample: SAMN02645053; Sample name: 190_1.sff; SRA: SRS560628
Organism
gut metagenome
unclassified entries; unclassified sequences; metagenomes; organismal metagenomes
Package
MIMS: metagenome/environmental, host-associated; version 6.0
Attributes
sample size1 grams feces
sample storage duration1 to 6 months
latitude and longitude42-02-05 N, 93-37-12 W
broad-scale environmental contextswine intestinal tract
perturbationnon-medicated
sample storage temperature-20 degrees Celsius
host sexmale
local-scale environmental contextnone
labelswine
host family relationshipOffspring of sow A
host taxonomy ID9825 (9825)
host growth conditionsambient
project nameAntibiotic (carbadox) effects on the swine gut microbiota
geographic locationUSA: Ames, Iowa
investigation typemetagenome
environmental mediumfreshly voided feces
sample material processing1 gram of freshly voided feces
collection date6/5/12
host common namepig
host body temperature39
environmental packageMIGS/MIMS/MIMARKS.host-associated
host age41 days
host190
host life stagegrower pig
host body productfeces
host dietTechStart 17-25 (Kent Feeds, Muscatine, IA)
host last mealnot fasted
Description

Keywords: GSC:MIxS;MIMS:6.0

BioProject
PRJNA237795 gut metagenome
Retrieve all samples from this project

Submission
USDA, Torey Looft; 2014-02-18
Accession:
SAMN02645053
ID:
2645053

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