TARA_20110512T2215Z_109_EVENT_PUMP_P_D_(30 m)_PROT... - BioSample

TARA_20110512T2215Z_109_EVENT_PUMP_P_D_(30 m)_PROT_NUC-DNA(100L)_W0.8-5_TARA_N000001732

Organism: marine metagenome
unclassified entries; unclassified sequences; metagenomes; ecological metagenomes

Attributes

depth	30
broad-scale environmental context	marine biome (ENVO:00000447)
local-scale environmental context	deep chlorophyll maximum layer (ENVO:xxxxxxxx)
environmental medium	particulate matter, including plankton (ENVO:xxxxxxxx)
environmental package	water
project name	Tara Oceans expedition (2009-2013)
sample name	TARA_N000001732
size-fraction lower threshold	0.8
size-fraction upper threshold	5
temperature	26.532035
Chlorophyll Sensor	0.737378
Citation	tbd
ENA first public	2014-07-15
ENA last update	2015-11-04
ENA-CHECKLIST	ERC000030
Event Date/Time End	2011-05-12T23:30
External Id	SAMEA2622345
INSDC center alias	GSC
INSDC center name	Genoscope
INSDC first public	2014-07-15T17:01:42Z
INSDC last update	2015-11-04T11:49:04Z
INSDC status	public
Latitude End	2.0663
Longitude End	-84.5304
Salinity Sensor	34.344808
Submitter Id	TARA_N000001732
event date/time start	2011-05-12T22:15
event label	TARA_20110512T2215Z_109_EVENT_PUMP
further details	tbd
last update date	2014-05-01Z
latitude start	2.0299
longitude start	-84.5546
marine region	(search radius=5 degrees) Marine Ecoregion:Eastern Galapagos Islands (MRGID:21870), Marine Ecoregion:Cocos Islands (MRGID:21970)
nitrate sensor	3.886605
oxygen sensor	203.127654
protocol label	PROT_NUC-DNA(100L)_W0.8-5
sample collection device	PUMP (High Volume Peristaltic Pump) with ECOTriplet
sample status	This version can be used to provide data discovery services
sampling campaign	TARA_20110509Z
sampling platform	SV Tara
sampling station	TARA_109

Description: This sample (TARA_N000001732) was collected during the Tara Oceans expedition (2009-2013) at station TARA_109 (latitudeN=2.0299, longitudeE=-84.5546) on date/time=2011-05-12T22:15, using a PUMP (High Volume Peristaltic Pump) with ECOTriplet. The sample material (particulate matter, including plankton (ENVO:xxxxxxxx)) was collected at a depth of 28-32 m, targeting a deep chlorophyll maximum layer (ENVO:xxxxxxxx) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.8-5 micrometres), and stored in liquid nitrogen for later detection of unicellular eukaryote (protist) nucleic acid sequences by pyrosequencing methods, and for later metagenomics analysis. This sample has replicate sample(s): TARA_N000001733.

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