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TARA_20101005T1828Z_072_EVENT_NET_N1_D_(100 m)_PROT_NUC-RNA(1L)_N5-20_TARA_N000000837

Identifiers
BioSample: SAMEA2657100; SRA: ERS490503
Organism
marine metagenome
unclassified entries; unclassified sequences; metagenomes; ecological metagenomes
Attributes
depth100
broad-scale environmental contextmarine biome (ENVO:00000447)
local-scale environmental contextdeep chlorophyll maximum layer (ENVO:xxxxxxxx)
environmental mediumparticulate matter, including plankton (ENVO:xxxxxxxx)
environmental packagewater
project nameTara Oceans expedition (2009-2013)
sample nameTARA_N000000837
size-fraction lower threshold5
size-fraction upper threshold20
temperature24.611235
Chlorophyll Sensor0.131719
Citationtbd
ENA first public2014-07-15
ENA last update2015-11-04
ENA-CHECKLISTERC000030
Event Date/Time End2010-10-05T18:50
External IdSAMEA2657100
INSDC center aliasGSC
INSDC center nameGenoscope
INSDC first public2014-07-15T17:01:43Z
INSDC last update2015-11-04T11:49:07Z
INSDC statuspublic
Latitude End-8.6746
Longitude End-18.018
Salinity Sensor36.474071
Submitter IdTARA_N000000837
event date/time start2010-10-05T18:28
event labelTARA_20101005T1828Z_072_EVENT_NET
further detailstbd
last update date2014-05-01Z
latitude start-8.6831
longitude start-18.0095
nitrate sensor0.315989
oxygen sensor196.74087
protocol labelPROT_NUC-RNA(1L)_N5-20
sample collection devicePLANKTON NET, TYPE=Single, MESH_Size_(�m)=5, MOUTH_Opening_(m^2)=0.196349, LENGTH_(m)=2.5
sample statusThis version can be used to provide data discovery services
sampling campaignTARA_20101003Z
sampling platformSV Tara
sampling stationTARA_072
Description

This sample (TARA_N000000837) was collected during the Tara Oceans expedition (2009-2013) at station TARA_072 (latitudeN=-8.6831, longitudeE=-18.0095) on date/time=2010-10-05T18:28, using a PLANKTON NET, TYPE=Single, MESH_Size_(�m)=5, MOUTH_Opening_(m^2)=0.196349, LENGTH_(m)=2.5. The sample material (particulate matter, including plankton (ENVO:xxxxxxxx)) was collected at a depth of 98-102 m, targeting a deep chlorophyll maximum layer (ENVO:xxxxxxxx) in the marine biome (ENVO:00000447). The sample was size-fractionated (5-20 micrometres), and stored in liquid nitrogen for later detection of unicellular eukaryote (protist) nucleic acid sequences by pyrosequencing methods, and for later metagenomics/transcriptomics analysis. This sample has replicate sample(s): TARA_N000000838.

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PRJEB4352 AHX
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Submission
EBI; 2014-07-17
Accession:
SAMEA2657100
ID:
2920518

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