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Uncultivated Roseovarius sp. UBA3070 genome recovered from SRX559946

Identifiers
BioSample: SAMN06455133; Sample name: Roseovarius sp. UBA3070; SRA: SRS2034319
Organism
Roseovarius sp. UBA3070
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Roseobacteraceae; Roseovarius; unclassified Roseovarius
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA: Coal Oil Point, Santa Barbara, California
isolateUBA3070
isolation sourceOil polluted marine water
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX559946 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated76.32%
contamination_estimated0.60%
environmental_sampletrue
genome_coverage195.85
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: SRR1313318.
Description

Uncultivated genome recovered from an assembly of the SRX559946 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455133
ID:
6455133

BioProject SRA Nucleotide

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