A Multinational Exploration on the Establishment o... - BioSample

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Result Filters

Organism: hospital metagenome
unclassified entries; unclassified sequences; metagenomes; ecological metagenomes

Attributes

collection date	2023-03-24
geographic location	Lebanon
elevation	37
broad-scale environmental context	urban biome
local-scale environmental context	hospital
environmental medium	anthropogenic environmental material
environmental package	built environment
geographic location	Lebanon:LB-BA:Beirut
geographic location	Lebanon
host subject id	BHL6
sample name	qiita_sid_14921:14921.BHL6
sample type	surface of toilet
ENA first public	2024-10-07
ENA-CHECKLIST	ERC000011
INSDC center name	UCSDMI
INSDC status	public
Submitter Id	qiita_sid_14921:14921.BHL6
abx_amikacin	no
abx_amoxicillin_clavulanacid	no
abx_ampicillin	no
abx_cefepime	no
abx_ceftazidime_avibactam	no
abx_ceftriaxone	no
abx_ciprofloxacin	no
abx_clarithromycin	no
abx_flucloxacilin	no
abx_imipenem	no
abx_linezolid	no
abx_meropenem	no
abx_metrodinazol	no
abx_piperacillin_tazobactam	no
abx_rifaximin	no
abx_teicoplanin	no
abx_trimetoprim_sulfamethoxazole	no
abx_vancomycin	no
anonymized_name	BHL6
city	Beirut
collection_timestamp	2023-03-24
dna_extracted	TRUE
empo_1	Free-living
empo_2	Free-living (non-saline)
empo_3	Solid (non-saline)
empo_4	Surface (non-saline)
extraction_date	2023-03-28
hospital	Hotel-Dieu de France
latitude	33.893791
longitude	35.501778
physical_specimen_location	not provided
physical_specimen_remaining	FALSE
qiita_sample_type	surface
scientific_name	hospital metagenome
storage_days	4
toilet_id	BHL6
ward	psychiatry
ward_type	low exposure
ward_type_subdivision	very low

Description: toilet bowl surface sample taken via COPAN ESwab collected from hospital center

A Multinational Exploration on the Establishment of Homogenized High-Risk Microb...
A Multinational Exploration on the Establishment of Homogenized High-Risk Microbial Communities in Toilets in the Clinical Setting; 14921.BHL6

biosample
Human sample from Homo sapiens
Human sample from Homo sapiens

biosample
PREDICTED: Homo sapiens serpin family B member 6 (SERPINB6), transcript variant ...
PREDICTED: Homo sapiens serpin family B member 6 (SERPINB6), transcript variant X10, mRNA
gi|2217361780|ref|XM_017010941.2|

Nucleotide
MIGS Eukaryotic sample from Sterna dougallii
MIGS Eukaryotic sample from Sterna dougallii

biosample
Aulorhynchus flavidus voucher FISHCARD_miu_664.1 small subunit ribosomal RNA gen...
Aulorhynchus flavidus voucher FISHCARD_miu_664.1 small subunit ribosomal RNA gene, partial sequence; mitochondrial
gi|2491777493|gb|OQ846688.1|

Nucleotide

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