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Animal sample from Microtus pennsylvanicus (meadow vole) for VGP reference genome, mMicPen1

Identifiers
BioSample: SAMN39894136; Sample name: Animal sample from Microtus pennsylvanicus (meadow vole) for VGP reference genome, mMicPen1; SRA: SRS21630863
Organism
Microtus pennsylvanicus (meadow vole)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus
Package
Model organism or animal; version 1.0
Attributes
isolatemMicPen1
development stageadult
collection date2022-04-04
geographic locationUSA: Ithaca, New York
sexmale
tissuespleen, muscle
biomaterial providerStanford University: David Ramirez
collected byLindsay Sailer
latitude and longitude42.4534 N 76.4735 W
storage conditions-80oC
treatmentFresh frozen
Description

The meadow vole (Microtus pennsylvanicus) is a North American vole found in eastern Canada and the United States. Its range extends farther south along the Atlantic coast (from Wikipedia entry). This sample of a male individual found in Ithaca, New York, was procured by Lindsay Sailer and David Ramirez, and coordinated by Lauren O'Connell and Jessica Nowicki to generate a high-quality reference genome for the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted at the Vertebrate Genome Lab (VGL) at the Rockefeller University, led by Erich D. Jarvis, Oliver Fedrigo, Giulio Formenti, and Jennifer Balacco.

BioProjects
PRJNA1123830
Retrieve all samples from this project

PRJNA1074850 Microtus pennsylvanicus isolate:mMicPen1
Retrieve all samples from this project

PRJNA1074849 Microtus pennsylvanicus isolate:mMicPen1
Retrieve all samples from this project

Submission
G10K, Erich Jarvis; 2024-02-08
Accession:
SAMN39894136
ID:
39894136

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