DNA extracted from Saccorhiza dermatodea strain Sd... - BioSample

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Result Filters

Organism: Saccorhiza dermatodea
cellular organisms; Eukaryota; Sar; Stramenopiles; Ochrophyta; PX clade; Phaeophyceae; Tilopteridales; Phyllariaceae; Saccorhiza

Attributes

collected by	Klaus Luning
collection date	missing: data agreement established pre-2023
culture collection	RCC7129
geographic location	missing: data agreement established pre-2023
ploidy	haploid
description	DNA extracted from Saccorhiza dermatodea strain SderLu1190fm for genome sequencing.
sample name	40Sd-1-A
sex	monoicous
strain	SderLu1190fm
tissue	whole thallus
Culture conditions	Air-bubbled 10 L carboy culture in Provasoli-enriched seawater with double strength Provasoli micronutrients.
DNA or RNA extracted	DNA
DNA or RNA quality (ratio 260/280)	1,82
ENA first public	2024-01-10
ENA-CHECKLIST	ERC000043
Extraction date	05/12/16
Extraction method	Macherey-Nagel Nucleospin Plant II midi DNA extraction kit
INSDC center name	Genoscope CEA
INSDC status	public
Submitter Id	40Sd-1-A
additional details	Genome of this strain sequenced as part of the Phaeoexplorer project. Sampled before 2000.
generation	gametophyte
geographic location (latitude)	missing: data agreement established pre-2023
geographic location (longitude)	missing: data agreement established pre-2023
identification by	Klaus Luning
identification method	Morphology, genome sequenced
ratio 260/230	1,15
sample alias	40Sd-1-A
sampling ecosystem	coastal
sampling sea	Atlantic Ocean
sampling site	No precise data, likely Atlantic Canada, or Greenland,
sampling water type	marine
scientific_name	Saccorhiza dermatodea
sequencing centre sample code	BSI_BP