MIMAG Metagenome-assembled Genome sample from Empe... - BioSample

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Result Filters

Organism: Empedobacter falsenii
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Flavobacteriia; Flavobacteriales; Weeksellaceae; Empedobacter

Attributes

isolate	CTOTU50635
collection date	2013-08-14
broad-scale environmental context	urban
local-scale environmental context	Missing
environmental medium	Missing
geographic location	USA
isolation source	urban
latitude and longitude	40.75 N 73.99 W
sample type	metagenomic assembly
metagenome source	urban metagenome
derived from	This BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accession SRR1750026, in SRA experiment SRX823409, under BioProject PRJNA271013
metagenomic	1
environmental-sample	1
BioProject for reads	PRJNA271013
SRA run accession	SRR1750026
SRA experiment accession	SRX823409

Submission: Helmholtz-Centre for Environmental Research - UFZ, Stefania Magnusdottir; 2022-06-17

MIMAG Metagenome-assembled Genome sample from Empedobacter falsenii
MIMAG Metagenome-assembled Genome sample from Empedobacter falsenii

biosample
PREDICTED: Homo sapiens phospholipase A2 group VII (PLA2G7), transcript variant ...
PREDICTED: Homo sapiens phospholipase A2 group VII (PLA2G7), transcript variant X1, mRNA
gi|2217363097|ref|XM_005249408.5|

Nucleotide
polygalacturonase [Elaeis guineensis]
polygalacturonase [Elaeis guineensis]
gi|448872674|gb|AGE46022.1|

Protein
Exo-poly-alpha-D-galacturonosidase precursor [Dickeya solani RNS 08.23.3.1.A]
Exo-poly-alpha-D-galacturonosidase precursor [Dickeya solani RNS 08.23.3.1.A]
gi|1298115534|gnl|PRJNA176848|D083_ gb|AUC42607.1|

Protein
type III effector NopAC [Bradyrhizobium japonicum]
type III effector NopAC [Bradyrhizobium japonicum]
gi|460416857|gb|AGH09994.1|

Protein

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