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PR40

Identifiers
BioSample: SAMEA8506540; SRA: ERS6191349
Organism
Nomascus leucogenys (northern white-cheeked gibbon)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Nomascus
Attributes
collection date2017-01-01
broad-scale environmental contextarea of developed open space
local-scale environmental contextgut
environmental mediumfecal environment
experimental factordemultiplexed sequence data
geographic locationCzech Republic
host body habitatgut
host common nameNorthern White-cheeked Gibbon
host dietFrugivore-folivore
host taxonomy ID61853 (61853)
investigation typebacteria_archaea
project nameCaptive primate gut microbiome
sample name31
sample storage temperature-20
sample volume or weight for DNA extraction0.2
ENA first public2021-05-31
ENA last update2021-05-31
ENA-CHECKLISTERC000013
External IdSAMEA8506540
INSDC center aliasCzech University of Life Sciences Prague
INSDC center nameCzech University of Life Sciences Prague
INSDC first public2021-05-31T00:18:50Z
INSDC last update2021-05-31T00:18:50Z
INSDC statuspublic
Submitter Id31
amount or size of sample collected0.01
common namenorthern white-cheeked gibbon
geographic location (latitude)50.7780603193684
geographic location (longitude)15.0808597119137
host-associated environmental packagehost-associated
nucleic acid extractionFast DNA SPIN kit for soil (MP Biomedicals)
pcr primers515F (5′-GTGCCAGCMGCCGCGGTAA-3′), 806R (5′-GGACTACHVGGGTWTCTAAT-3′)
sequencing methodIllumina NovaSeq
target gene16S rRNA gene
BioProject
PRJEB44101 Captive primate gut microbiome
Retrieve all samples from this project

Submission
EBI; 2021-06-01
Accession:
SAMEA8506540
ID:
19476150

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