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Organizing biological data

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Select item 11180701.

Enterococcus cecorum isolated from chickens with spondylolisthesis on Australian farms

: Project data type: Genome sequencing

Scope:: Multispecies

RMIT University

Accession:: PRJNA1118070
ID:: 1118070

Select item 11104822.

Metagenomic characterisation of the caecal microbiota of XCR1 wild-type and knockout chickens, with and without infectious bronchitis virus vaccination

: Project data type: Genome sequencing

Scope:: Monoisolate

the roslin institute (university of edinburgh)

Accession:: PRJEB64517
ID:: 1110482

Select item 10717193.

Genotypic and phenotypic characterization of antimicrobial resistance of Enterococcus cecorum isolates from broiler chickens

: Project data type: Genome sequencing

Scope:: Multispecies

Universiteit Gent

Accession:: PRJNA1071719
ID:: 1071719

Select item 10625794.

Accurate identification of Enterococcus lactis causing bacteraemia

: Project data type: Raw sequence reads

Scope:: Multispecies

Murdoch University

Accession:: PRJNA1062579
ID:: 1062579

Select item 10507465.

Enterococcus cecorum

Enterococcus cecorum Genome sequencing and assembly

Taxonomy:: Enterococcus cecorum

: Project data type: Genome sequencing and assembly

Scope:: Multiisolate

UNIVERSITY OF ARKANSAS

Accession:: PRJNA1050746
ID:: 1050746

Select item 10306526.

Metagenome-Assembled Genomes of the cat gut microbiota

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

Institut National pour la Recherche Agronomique (FRANCE)

Accession:: PRJEB67522
ID:: 1030652

Select item 9831877.

Altitude-dependent climate zones shape the microbiome diversity of the scavenging indigenous chicken in Ethiopia

Ethiopian chicken caecal microbiota

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

addis ababa university

Accession:: PRJEB57055
ID:: 983187

Select item 9485488.

transmission chain of oxazolidinone resistance genes through one health approach

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

The Second Affiliated Hospital of Zhejiang University School of Medicine, Zhejiang University

Accession:: PRJNA948548
ID:: 948548

Select item 9482749.

HoloFood Chicken Ileum MAG catalogue

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

UNIVERSITY OF COPENHAGEN

Accession:: PRJEB55375
ID:: 948274

Select item 94827310.

HoloFood Chicken Caecum MAG catalogue

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

UNIVERSITY OF COPENHAGEN

Accession:: PRJEB55374
ID:: 948273

Select item 92281911.

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Enterococcus cecorum genome sequencing and assembly of French avian clinical isolates

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

INRAE

Accession:: PRJEB50514
ID:: 922819

Select item 89492412.

Characterization by shotgun sequencing of the caecal metagenome of broilers raised in a farm in the American Midwest.

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

Institut National pour la Recherche Agronomique (FRANCE)

Accession:: PRJEB53667
ID:: 894924

Select item 88660113.

EMG produced TPA metagenomics assembly of PRJEB42464 data set (Gut Microbiomes of European Farm Rainbow Trout).

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

EMG

Accession:: PRJEB56417
ID:: 886601

Select item 85396114.

Typing of Enterococcus cecorum isolates in a chicken embryo lethality assay using different inoculation routes

: Project data type: Raw sequence reads

Scope:: Multispecies

Royal GD Animal Health

Accession:: PRJNA853961
ID:: 853961

Select item 85076115.

Primary metagenome assemblies and Metagenome-Assembled Genomes of the MetaChick project

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

Institut National pour la Recherche Agronomique (FRANCE)

Accession:: PRJEB53581
ID:: 850761

Select item 85025716.

EMG produced TPA metagenomics assembly of PRJNA408025 data set (Global studies of microbial diversity in pig gut).

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

EMG

Accession:: PRJEB53600
ID:: 850257

Select item 80824217.

Enterococcus cecorum genome sequencing

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

Universidade Federal do Rio de Janeiro

Accession:: PRJNA808242
ID:: 808242

Select item 79895718.

EMG produced TPA metagenomics assembly of PRJEB33338 data set (Metagenomics of chicken cecal contents from fast and slower growing birds).

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

EMG

Accession:: PRJEB50262
ID:: 798957

Select item 77940419.

Florfenicol treatment and the piglet gut microbiome

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

Agriculture and Agri-Food Canada

Accession:: PRJNA779404
ID:: 779404

Select item 70497520.

Genomic analysis of Enterococccus cecorum

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

Church and Dwight

Accession:: PRJNA704975
ID:: 704975

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HoloFood Chicken Caecum MAG catalogue
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HoloFood Chicken Caecum MAG catalogue

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