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BioProject

Organizing biological data

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Items: 19

Select item 11236561.

Total of 44 samples of pooled amplicon DNA sequences of a set of five fruit sugar-related genes in 14 species from the wild tomato clade (Solanum Sect. Lycopersicon)

: Project data type: Raw sequence reads

Scope:: Multispecies

University of Massachusetts Amherst

Accession:: PRJNA1123656
ID:: 1123656

Select item 10947502.

Small RNA transcriptomes from wild tomato stem trichomes

Stem trichome small RNA-seq analysis of wild tomato relatives (Solanum section Lycopersicon)

: Project data type: Other

Scope:: Monoisolate

UNIVERSITY OF AMSTERDAM

Accession:: PRJEB46617
ID:: 1094750

Select item 10947443.

Wild tomato trichome transcriptome

Stem trichome mRNA-seq analysis of wild tomato relatives (Solanum section Lycopersicon)

: Project data type: Other

Scope:: Monoisolate

UNIVERSITY OF AMSTERDAM

Accession:: PRJEB44371
ID:: 1094744

Select item 8788234.

Total of 87 sampled plants of 15 species from the clade including cultivated tomato and its wild relatives (Solanum Sect. Lycopersicon)

: Project data type: Raw sequence reads

Scope:: Multispecies

University of Massachusetts Amherst

Accession:: PRJNA878823
ID:: 878823

Select item 8624745.

Solanum arcanum cultivar:LA2157

Solanum arcanum cultivar:LA2157 Genome sequencing and assembly

Taxonomy:: Solanum arcanum

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

Chinese Academy of Agricultural Sciences

Accession:: PRJNA862474
ID:: 862474

Select item 8233236.

Solanum arcanum

Solanum arcanum RefSeq Genome

Taxonomy:: Solanum arcanum

: Project data type: RefSeq Genome

Scope:: Monoisolate

NCBI

Accession:: PRJNA823323
ID:: 823323

Select item 7955067.

Resistance gene enrichment sequencing (RenSeq) of Solanaceae

: Project data type: Raw sequence reads

Scope:: Multispecies

The University of California, Berkeley

Accession:: PRJNA795506
ID:: 795506

Select item 6656258.

Population genomics of wild tomatoes

: Project data type: Raw sequence reads

Scope:: Multispecies

UZH

Accession:: PRJNA665625
ID:: 665625

Select item 6390379.

Comparative RNA-Seq analysis reveals potentially resistance-related genes in response to Bacterial canker of tomato

: Project data type: Transcriptome or Gene expression

Scope:: Multispecies

CNS, CONACyT IPICyT

Accession:: PRJNA639037
ID:: 639037

Select item 60038510.

Solanum

RNA-seq of tomato leaf and flower tissues

: Project data type: Raw sequence reads

Scope:: Multispecies

Institute for Evolution and Biodiversity

Accession:: PRJNA600385
ID:: 600385

Select item 59835811.

Cultivated and wild tomato sequencing by Illumina MiSeq

: Project data type: Raw sequence reads

Scope:: Multispecies

Anand Agricultural University

Accession:: PRJNA598358
ID:: 598358

Select item 54223712.

Single Primer Enrichment Technology (SPET) for high-throughput genotyping in tomato

: Project data type: Raw sequence reads

Scope:: Multispecies

G2PSOL

Accession:: PRJNA542237
ID:: 542237

Select item 47673813.

SOLUTION

Investigation of domestication footprints in three major Solanaceae species

: Project data type: Other

Scope:: Monoisolate

INRA

Accession:: PRJEB26324
ID:: 476738

Select item 42709514.

Solanum

Genomic imprinting in wild tomato endosperm

: Project data type: Raw sequence reads

Scope:: Multispecies

ETH Zurich

Accession:: PRJNA427095
ID:: 427095

Select item 30588015.

Lycopersicon

Solanum section Lycopersicon phylotranscriptomic characterization

: Project data type: Transcriptome or Gene expression

Scope:: Multispecies

Indiana University

Accession:: PRJNA305880
ID:: 305880

Select item 23698916.

Solanum arcanum cultivar:LA2157

Solanum arcanum LA2157 - Exploring genetic variation in the tomato (Solanum section Lycopersicon) clade by whole-genome sequencing

Taxonomy:: Solanum arcanum

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

Plant Research International

Accession:: PRJEB5226
ID:: 236989

Select item 23698817.

The 100 tomato genome project

84 tomato accessions - Exploring genetic variation in the tomato (Solanum section Lycopersicon) clade by whole-genome sequencing

: Project data type: Other

Scope:: Monoisolate

Plant Research International

Accession:: PRJEB5235
ID:: 236988

Select item 23052418.

Total of 46 sampled plants from wild tomato species Solanum peruvianum, Solanum arcanum, Solanum huaylasense, Solanum corneliomuelleri. Solanum neorickii, Solanum chmielewskii Genome sequencing

: Project data type: Genome sequencing

Scope:: Multispecies

USDA, ARS Plant Genetic Resources Unit

Accession:: PRJNA230524
ID:: 230524

Select item 21447119.

Solanum arcanum strain:LA2157

De novo sequencing and assembly of Solanum arcanum

Taxonomy:: Solanum arcanum

: Project data type: Genome sequencing

Scope:: Monoisolate

The 150 tomato genomes sequencing consortium

Accession:: PRJNA214471
ID:: 214471

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