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Organizing biological data
Mus musculus
A transcriptional atlas of gut-innervating neurons reveals activation of the interferon and ferroptosis pathway during intestinal inflammation
Single cell methylation, RNA, and ATAC sequencing of brain tissue in inbred mouse strains
Stem cell transcriptional profiles from mouse subspecies reveal cis-regulatory evolution at ribosomal large-subunit genes
Derivation of embryonic stem cells from wild-derived mouse strains by nuclear transfer using peripheral blood cells
Mus musculus castaneus
Lawal, R.A. et al. Taxonomic assessment of two wild house mouse subspecies using whole-genome sequencing. Sci Rep 12, 20866 (2022). https://doi.org/10.1038/s41598-022-25420-x
mousegenomes
Reference quality genomes for key laboratory mouse strains from the EMBL-EBI/Wellcome Sanger Institute based Mouse Genomes Project.
Genetic variation at mouse and human ribosomal DNA influences associated epigenetic states
RNA-seq data related to FYN-TRAF3IP2 mouse model
FYN-TRAF3IP2 and KHDRBS1-LCK hijack T cell receptor signaling in peripheral T cell lymphoma, not otherwise specified
Lesion Segregation
Liver Cancer Evolution - Lesion segregation
ChIP-seq analyses of CTCF binding in liver samples from CAST/EiJ and SPRET/EiJ (Mus spretus) mice, and of the cohesin subunit RAD21 in C57BL/6J mouse liver
Mus musculus castaneus strain:Cast/EiJ
Cast/EiJ mouse oocyte methylome
SCRNAseq_CD4_T_memory
Impact of aging on cell-to-cell transcriptional variability during immune stimulation
New exome sequencing of wild derived inbred strains of mice significantly improves power to link phenotype and genotype Exome
Transcriptomes of wild mice
Transcriptome sequencing of three tissues and ten taxa related to the house mouse Mus musculus
Transcriptome sequencing of three tissues and ten taxa related to the house mouse Mus musculus.
Laboratory_mouse_whole_transcript_sequencing
Developmental_and_molecular_heterogeneity_of_mouse_hematopoietic_stem_cells
RNAseq_of_mouse_POMC_neurons
Evolutionary analysis across mammals reveals distinct classes of long noncoding RNAs
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