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Organizing biological data

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Select item 11799661.

Nucleo-cytoplasmic distribution of SAP18 reveals its dual function in splicing regulation and heat stress responses in Arabidopsis

Organism:: Arabidopsis thaliana

Taxonomy:: Arabidopsis thaliana (thale cress)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

CRAG

Accession:: PRJNA1179966
ID:: 1179966

Select item 11760702.

Arabidopsis thaliana

Genome re-sequencing of heavy-ion induced Arabidopsis mutants

Taxonomy:: Arabidopsis thaliana (thale cress)

: Project data type: Genome sequencing

Scope:: Monoisolate

Faculty of Bioscience and Biotechnology, Fukui Prefectural University

Accession:: PRJDB17541
ID:: 1176070

Select item 11760573.

Arabidopsis thaliana

RNA-seq to analyze FLC levels after treatment with DVR or heat

Taxonomy:: Arabidopsis thaliana (thale cress)

: Project data type: Transcriptome or Gene expression

Scope:: Monoisolate

Plant Stem Cell Regulation and Floral Patterning Laboratory Division of Biological Science Graduate School of Science and Technology, Nara Institute of Science and Technology

Accession:: PRJDB18947
ID:: 1176057

Select item 11760564.

Arabidopsis thaliana

H3K27me3 levels with and without DVR06

Taxonomy:: Arabidopsis thaliana (thale cress)

: Project data type: Epigenomics

Scope:: Monoisolate

Plant Stem Cell Regulation and Floral Patterning Laboratory Division of Biological Science Graduate School of Science and Technology, Nara Institute of Science and Technology

Accession:: PRJDB18946
ID:: 1176056

Select item 11760505.

Arabidopsis thaliana

K36me3 levels in WT and sdg7 sdg8

Taxonomy:: Arabidopsis thaliana (thale cress)

: Project data type: Epigenomics

Scope:: Monoisolate

Plant Stem Cell Regulation and Floral Patterning Laboratory Division of Biological Science Graduate School of Science and Technology, Nara Institute of Science and Technology

Accession:: PRJDB17517
ID:: 1176050

Select item 11760496.

Arabidopsis thaliana

K36me2 levels in WT and sdg7 sdg8

Taxonomy:: Arabidopsis thaliana (thale cress)

: Project data type: Epigenomics

Scope:: Monoisolate

Plant Stem Cell Regulation and Floral Patterning Laboratory Division of Biological Science Graduate School of Science and Technology, Nara Institute of Science and Technology

Accession:: PRJDB17516
ID:: 1176049

Select item 11760487.

Arabidopsis thaliana

SDG7 and SDG8 ChIP in Arabidopsis thaliana

Taxonomy:: Arabidopsis thaliana (thale cress)

: Project data type: Genome sequencing

Scope:: Monoisolate

Plant Stem Cell Regulation and Floral Patterning Laboratory Division of Biological Science Graduate School of Science and Technology, Nara Institute of Science and Technology

Accession:: PRJDB17502
ID:: 1176048

Select item 11756178.

HD2B and HD2C interact with Argonaute 4 to promote tolerance and heterochromatin stabilization during heat stress [ChIP-Seq]

Organism:: Arabidopsis thaliana

Taxonomy:: Arabidopsis thaliana (thale cress)

: Project data type: Epigenomics

Scope:: Multiisolate

Wuhan university

Accession:: PRJNA1175617
ID:: 1175617

Select item 11720999.

Arabidopsis thaliana

Arabidopsis thaliana Raw sequence reads

Taxonomy:: Arabidopsis thaliana (thale cress)

: Project data type: Raw sequence reads

Scope:: Monoisolate

Xing Yang Agricultural College

Accession:: PRJNA1172099
ID:: 1172099

Select item 116899610.

Trans-generational adaptation to maternal climate through hormone transport in plants [bulk RNA-seq]

Organism:: Arabidopsis thaliana

Taxonomy:: Arabidopsis thaliana (thale cress)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Steven Penfield, Crop Genetics, John Innes Centre

Accession:: PRJNA1168996
ID:: 1168996

Select item 116897011.

Transcriptome analysis reveals genes responsive to three low-temperature treatments in Arabidopsis thaliana

Organism:: Arabidopsis thaliana

Taxonomy:: Arabidopsis thaliana (thale cress)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

CNS, CONACyT IPICyT

Accession:: PRJNA1168970
ID:: 1168970

Select item 116807012.

Arabidopsis thaliana

Arabidopsis thaliana Raw sequence reads

Taxonomy:: Arabidopsis thaliana (thale cress)

: Project data type: Raw sequence reads

Scope:: Monoisolate

Nanjing Forestry University

Accession:: PRJNA1168070
ID:: 1168070

Select item 116776213.

RNA half-life regulation reveals countercyclical regulation of buffered RNAs and RNAs undergoing changes in abundance

Organism:: Arabidopsis thaliana

Taxonomy:: Arabidopsis thaliana (thale cress)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Biology, University of Utah

Accession:: PRJNA1167762
ID:: 1167762

Select item 116775314.

RNA half-life regulation reveals countercyclical regulation of buffered RNAs and RNAs undergoing changes in abundance [trim-Qfilt]

Organism:: Arabidopsis thaliana

Taxonomy:: Arabidopsis thaliana (thale cress)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Biology, University of Utah

Accession:: PRJNA1167753
ID:: 1167753

Select item 116721015.

Arabidopsis thaliana

Arabidopsis thaliana Transcriptome or Gene expression

Taxonomy:: Arabidopsis thaliana (thale cress)

: Project data type: Transcriptome or Gene expression

Scope:: Monoisolate

Sichuan University

Accession:: PRJNA1167210
ID:: 1167210

Select item 116581816.

Investigating CLSY proteins and Pol-IV complex interaction in controlling DNA methylation patterns in Arabidopsis thaliana

Organism:: Arabidopsis thaliana

Taxonomy:: Arabidopsis thaliana (thale cress)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Salk Institute for Biological Studies

Accession:: PRJNA1165818
ID:: 1165818

Select item 116514317.

Jasmonic acid signaling and glutathione coordinate plant recovery from high light stress

Organism:: Arabidopsis thaliana

Taxonomy:: Arabidopsis thaliana (thale cress)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Molecular Plant Biology, University of Turku

Accession:: PRJNA1165143
ID:: 1165143

Select item 116501218.

Arabidopsis thaliana

Mutation detection in M1 plants after carbon ion beam irradiation to Arabidopsis seeds and seedlings

Taxonomy:: Arabidopsis thaliana (thale cress)

: Project data type: Genome sequencing

Scope:: Monoisolate

Takasaki Institute for Advanced Quantum Science, National Institutes for Quantum and Science and Technology (QST)

Accession:: PRJDB17456
ID:: 1165012

Select item 116242619.

Comparative characterization of the seven H3K4 methyltransferases in Arabidopsis thaliana

Organism:: Arabidopsis thaliana

Taxonomy:: Arabidopsis thaliana (thale cress)

: Project data type: Epigenomics

Scope:: Multiisolate

Plant Sciences, UC Davis

Accession:: PRJNA1162426
ID:: 1162426

Select item 115380420.

Arabidopsis thaliana

Regulation of myrosin cell development by a transcription factor, WSB, in Arabidopsis

Taxonomy:: Arabidopsis thaliana (thale cress)

: Project data type: Targeted Locus (Loci)

Scope:: Monoisolate

Plant Stem Cell Regulation and Floral Patterning Laboratory Division of Biological Science Graduate School of Science and Technology, Nara Institute of Science and Technology