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Items: 11

1.

Oxytricha trifallax

Oxytricha trifallax developmental life cycle

Taxonomy:
Oxytricha trifallax
Project data type: Transcriptome or Gene expression
Scope:
Monoisolate
Columbia University Medical Center
Accession:
PRJNA665991
ID:
665991
2.

Role of small RNAs in gene dosage regulation in the ciliate Oxytricha trifallax

Taxonomy:
Oxytricha trifallax
Project data type: Other
Scope:
Multiisolate
Columbia University
Accession:
PRJNA408164
ID:
408164
3.

Oxytricha trifallax

Oxytricha trifallax sRNA sequences

Taxonomy:
Oxytricha trifallax
Project data type: Raw sequence reads
Scope:
Multiisolate
Columbia University
Accession:
PRJNA407474
ID:
407474
4.

Oxytricha trifallax

mRNA Expression Profiles of Macronuclear Development in Oxytricha trifallax Implicate Scores of Functionally and Evolutionarily Diverse DNA and RNA Binding Proteins in the Program

Taxonomy:
Oxytricha trifallax
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Zahler Lab, MCD Biology, UC Santa Cruz
Accession:
PRJNA340200
ID:
340200
5.

Oxytricha trifallax strain:JRB310

Oxytricha trifallax Micronuclear Genome sequencing

Taxonomy:
Oxytricha trifallax
Project data type: RefSeq Genome sequencing
Scope:
Monoisolate
NCBI
Accession:
PRJNA257306
ID:
257306
6.

Oxytricha trifallax

ChIP-seq analysis of Rpb1 from 12hr conjugating Oxytricha trifallax cells

Taxonomy:
Oxytricha trifallax
Project data type: Epigenomics
Scope:
Multiisolate
Columbia University
Accession:
PRJNA240578
ID:
240578
7.

Oxytricha trifallax strain:JRB310

Oxytricha trifallax Micronuclear Genome sequencing

Taxonomy:
Oxytricha trifallax
Project data type: Genome sequencing and assembly
Scope:
Monoisolate
Princeton University
Accession:
PRJNA194431
ID:
194431
8.

Oxytricha trifallax

Cytosine methylation and hydroxymethylation mark DNA for elimination in Oxytricha trifallax.

Taxonomy:
Oxytricha trifallax
Project data type: Epigenomics
Scope:
Multiisolate
Princeton University
Accession:
PRJNA175642
ID:
175642
9.

Oxytricha trifallax

Oxytricha trifallax methylcytosine and hydroxymethylcytosine immunoprecipitation sequencing (ChIP-seq)

Taxonomy:
Oxytricha trifallax
Project data type: Genome sequencing
Scope:
Multiisolate
Princeton University
Accession:
PRJNA175528
ID:
175528
10.

Oxytricha trifallax

sRNA profiling during Oxytricha conjugation

Taxonomy:
Oxytricha trifallax
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Landweber, EEB, Princeton University
Accession:
PRJNA172748
ID:
172748
11.

Oxytricha trifallax

Mating of the stichotrichous ciliate Oxytricha trifallax induces production of a class of 27nt small RNAs derived from the parental macronucleus

Taxonomy:
Oxytricha trifallax
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Zahler Lab, MCD Biology, UC Santa Cruz
Accession:
PRJNA159889
ID:
159889

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