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Items: 1 to 20 of 22

1.

Comparative genomics reveals intra and inter species variation in the pathogenic fungus Batrachochytrium dendrobatidis

Taxonomy:
Batrachochytrium dendrobatidis
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Jason Stajich, Microbiology and Plant Pathology, University of California, Riverside
Accession:
PRJNA1067654
ID:
1067654

2.

Endogenized hypervirulence-associated DNA virus BdDV-1 is primarily restricted to enzootic lineages of the amphibian pathogen Batrachochytrium dendrobatidis

Taxonomy:
Batrachochytrium dendrobatidis
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Jason Stajich, Microbiology and Plant Pathology, University of California, Riverside
Accession:
PRJNA1034634
ID:
1034634

3.

Batrachochytrium dendrobatidis strain:CLFT067

Batrachochytrium dendrobatidis CLFT067 Genome sequencing and assembly

Taxonomy:
Batrachochytrium dendrobatidis
Project data type: Genome sequencing and assembly
Scope:
Monoisolate
University of California, Riverside
Accession:
PRJNA987741
ID:
987741

4.

Batrachochytrium dendrobatidis strain:CLFT071

Batrachochytrium dendrobatidis CLFT071 Genome sequencing and assembly

Taxonomy:
Batrachochytrium dendrobatidis
Project data type: Genome sequencing and assembly
Scope:
Monoisolate
University of California, Riverside
Accession:
PRJNA913953
ID:
913953

5.

Batrachochytrium dendrobatidis strain:GPL

Early presence of Batrachochytrium dendrobatidis in Mexico with a contemporary dominance of the global panzootic lineage

Taxonomy:
Batrachochytrium dendrobatidis
Project data type: Targeted Locus (Loci)
Scope:
Multiisolate
UC Berkeley
Accession:
PRJNA625344
ID:
625344

6.

Batrachochytrium dendrobatidis strain:GPL

Fungal infection, decline, and persistence in the only obligate troglodytic Neotropical salamander

Taxonomy:
Batrachochytrium dendrobatidis
Project data type: Raw sequence reads
Scope:
Monoisolate
UC Berkeley
Accession:
PRJNA608001
ID:
608001

7.

Batrachochytrium dendrobatidis strain:VM1

Batrachochytrium dendrobatidis transcriptome of zoospores, sporangia, and monolayer-associated cells

Taxonomy:
Batrachochytrium dendrobatidis
Project data type: Raw sequence reads
Scope:
Monoisolate
Texas Tech University
Accession:
PRJNA563776
ID:
563776

8.

Batrachochytrium dendrobatidis

Cryptic diversity of a widespread global pathogen reveals new threats for amphibian conservation

Taxonomy:
Batrachochytrium dendrobatidis
Project data type: Raw sequence reads
Scope:
Monoisolate
UC Berkeley
Accession:
PRJNA555719
ID:
555719

9.

Batrachochytrium dendrobatidis strain:RTP6

Batrachochytrium dendrobatidis strain:RTP6 Genome sequencing and assembly

Taxonomy:
Batrachochytrium dendrobatidis
Project data type: Genome sequencing and assembly
Scope:
Monoisolate
University of Otago
Accession:
PRJNA483086
ID:
483086

10.

Batrachochytrium dendrobatidis

The spatial epidemiology and molecular evolution of panzootic amphibian chytridiomycosis

Taxonomy:
Batrachochytrium dendrobatidis
Project data type: Raw sequence reads
Scope:
Multiisolate
Imperial College London
Accession:
PRJNA413876
ID:
413876

11.

Batrachochytrium dendrobatidis strain:Bd-GPL

Shifts in disease dynamics of a lethal amphibian disease are not due to pathogen attenuation

Taxonomy:
Batrachochytrium dendrobatidis
Project data type: Raw sequence reads
Scope:
Multiisolate
UC Berkeley
Accession:
PRJNA395742
ID:
395742

12.

Batrachochytrium dendrobatidis JEL423

RNAseq of Batrachochytrium dendrobatidis JEL423 in vitro (Farrer et al NatComm 2017)

Taxonomy:
Batrachochytrium dendrobatidis JEL423
Project data type: Raw sequence reads
Scope:
Monoisolate
Broad Insititute
Accession:
PRJNA326253
ID:
326253

13.

Batrachochytrium dendrobatidis

In vivo Bd gene expression

Taxonomy:
Batrachochytrium dendrobatidis
Project data type: Raw sequence reads
Scope:
Multispecies
Cornell University
Accession:
PRJNA299101
ID:
299101

14.

Batrachochytrium dendrobatidis strain:Section Line

Batrachochytrium dendrobatidis Genome resequencing

Taxonomy:
Batrachochytrium dendrobatidis
Project data type: Genome sequencing
Scope:
Monoisolate
UC Berkeley
Accession:
PRJNA265883
ID:
265883

15.

Batrachochytrium dendrobatidis JAM81

Batrachochytrium dendrobatidis JAM81 RefSeq Genome

Taxonomy:
Batrachochytrium dendrobatidis JAM81
Project data type: RefSeq Genome
Scope:
Monoisolate
NCBI
Accession:
PRJNA225502
ID:
225502

16.

Batrachochytrium dendrobatidis

DNAseq of Batrachochytrium dendrobatidis (Farrer et al PNAS 2011)

Taxonomy:
Batrachochytrium dendrobatidis
Project data type: Genome sequencing
Scope:
Multiisolate
Imperial College London
Accession:
PRJNA222638
ID:
222638

17.

Batrachochytrium dendrobatidis

Complex History of the Bd Chytrid Fungus revealed through genome resequencing

Taxonomy:
Batrachochytrium dendrobatidis
Project data type: Variation
Scope:
Multiisolate
University of California, Riverside
Accession:
PRJNA183867
ID:
183867

18.

Batrachochytrium dendrobatidis

DNAseq of Batrachochytrium dendrobatidis at BGI (Farrer et al PLoS Genet 2013)

Taxonomy:
Batrachochytrium dendrobatidis
Project data type: Genome sequencing
Scope:
Multiisolate
Imperial College London
Accession:
PRJNA174850
ID:
174850

19.

Batrachochytrium dendrobatidis

DNAseq of Batrachochytrium dendrobatidis (Farrer et al PLoS Genet 2013)

Taxonomy:
Batrachochytrium dendrobatidis
Project data type: Genome sequencing
Scope:
Multiisolate
Imperial College London
Accession:
PRJNA174849
ID:
174849

20.

Batrachochytrium dendrobatidis strain:multiple strains

Multi-isolate project for Batrachochytrium dendrobatidis

Taxonomy:
Batrachochytrium dendrobatidis
Project data type: Variation
Scope:
Multiisolate
Imperial College London
Accession:
PRJNA63423
ID:
63423

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