U.S. flag

An official website of the United States government

Display Settings:

Format

Send to:

Choose Destination

Links from SRA

Accession: PRJNA983111 ID: 983111

Bradyrhizobium

Phylogenetic and population structure of the nod-free but nodulating Bradyrhizobium phylogroup

we sequenced 208 new PB members predominantly associated with rice. The extended PB phylogroup comprises three main clades: a basal clade with significant expansion of its diversity, followed by the diversification of a singleton clade from a new clade exclusively represented by our strains. More...
AccessionPRJNA983111
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismBradyrhizobium[Taxonomy ID: 374]
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium
SubmissionRegistration date: 4-Oct-2023
The Chinese University of Hong Kong
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)208
SRA Experiments208
Other datasets
BioSample208
Assembly208
Assembly details:
Assembly levelNumber of Assemblies
208
208
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_032381575.1ContigJAUHIW000000000SAMN35993483
SZCCHNF30212
GCA_032381515.1ContigJAUHIV000000000SAMN35993481
SZCCHNG3015
GCA_032489995.1ContigJAUEZC000000000SAMN35993482
SZCCHNGR1005
GCA_032381555.1ContigJAUHIU000000000SAMN35993541
SZCCHNPS1003
GCA_032489975.1ContigJAUEZB000000000SAMN35993542
SZCCHNPS10061
GCA_032381395.1ContigJAUHIT000000000SAMN35993543
SZCCHNPS10062
GCA_032489935.1ContigJAUEZA000000000SAMN35993544
SZCCHNPS2010
GCA_032381435.1ContigJAUHIS000000000SAMN35993545
SZCCHNR1002
GCA_032489955.1ContigJAUEYZ000000000SAMN35993546
SZCCHNR1004
GCA_032489915.1ContigJAUEYY000000000SAMN35993547
SZCCHNR1007
GCA_032489895.1ContigJAUEYX000000000SAMN35993548
SZCCHNR1011
GCA_032489875.1ContigJAUEYW000000000SAMN35993549
SZCCHNR1015
GCA_032489835.1ContigJAUEYV000000000SAMN35993550
SZCCHNR1016
GCA_032381375.1ContigJAUHIR000000000SAMN35993551
SZCCHNR1017
GCA_032381315.1ContigJAUHIQ000000000SAMN35993552
SZCCHNR1018
GCA_032381335.1ContigJAUHIP000000000SAMN35993553
SZCCHNR1019
GCA_032489855.1ContigJAUEYU000000000SAMN35993554
SZCCHNR1020
GCA_032489815.1ContigJAUEYT000000000SAMN35993555
SZCCHNR1021
GCA_032489795.1ContigJAUEYS000000000SAMN35993556
SZCCHNR1022
GCA_032489775.1ContigJAUEYR000000000SAMN35993557
SZCCHNR1023
GCA_032489755.1ContigJAUEYQ000000000SAMN35993558
SZCCHNR1025
GCA_032489735.1ContigJAUEYP000000000SAMN35993559
SZCCHNR1030
GCA_032381215.1ContigJAUHJN000000000SAMN35993560
SZCCHNR1035
GCA_032489715.1ContigJAUEYO000000000SAMN35993561
SZCCHNR1039
GCA_032489675.1ContigJAUEYN000000000SAMN35993562
SZCCHNR1043
GCA_032489695.1ContigJAUEYM000000000SAMN35993563
SZCCHNR1044
GCA_032489655.1ContigJAUEYL000000000SAMN35993564
SZCCHNR1045
GCA_032489635.1ContigJAUEYK000000000SAMN35993565
SZCCHNR1047
GCA_032489615.1ContigJAUEYJ000000000SAMN35993566
SZCCHNR1051
GCA_032381235.1ContigJAUHJM000000000SAMN35993567
SZCCHNR1053
GCA_032489575.1ContigJAUEYI000000000SAMN35993568
SZCCHNR1058
GCA_032489595.1ContigJAUEYH000000000SAMN35993569
SZCCHNR1064
GCA_032489555.1ContigJAUEYG000000000SAMN35993570
SZCCHNR1065
GCA_032489535.1ContigJAUEYF000000000SAMN35993571
SZCCHNR1066
GCA_032489515.1ContigJAUEYE000000000SAMN35993572
SZCCHNR1070
GCA_032381195.1ContigJAUHJL000000000SAMN35993573
SZCCHNR1075
GCA_032489475.1ContigJAUEYD000000000SAMN35993574
SZCCHNR1082
GCA_032381035.1ContigJAUHJK000000000SAMN35993575
SZCCHNR1083
GCA_032489495.1ContigJAUEYC000000000SAMN35993576
SZCCHNR1085
GCA_032489455.1ContigJAUEYB000000000SAMN35993577
SZCCHNR1091
GCA_032489435.1ContigJAUEYA000000000SAMN35993578
SZCCHNR1092
GCA_032381175.1ContigJAUHJJ000000000SAMN35993579
SZCCHNR1093
GCA_032489415.1ContigJAUEXZ000000000SAMN35993580
SZCCHNR1097
GCA_032489375.1ContigJAUEXY000000000SAMN35993581
SZCCHNR1098
GCA_032489395.1ContigJAUEXX000000000SAMN35993582
SZCCHNR1099
GCA_032489355.1ContigJAUEXW000000000SAMN35993583
SZCCHNR2001
GCA_032489335.1ContigJAUEXV000000000SAMN35993584
SZCCHNR2002
GCA_032489315.1ContigJAUEXU000000000SAMN35993585
SZCCHNR2003
GCA_032381135.1ContigJAUHJI000000000SAMN35993586
SZCCHNR2009
GCA_032381015.1ContigJAUHJH000000000SAMN35993587
SZCCHNR2011
GCA_032380975.1ContigJAUHJG000000000SAMN35993588
SZCCHNR2012
GCA_032489295.1ContigJAUEXT000000000SAMN35993589
SZCCHNR2017
GCA_032489275.1ContigJAUEXS000000000SAMN35993590
SZCCHNR2020
GCA_032489235.1ContigJAUEXR000000000SAMN35993591
SZCCHNR2023
GCA_032489255.1ContigJAUEXQ000000000SAMN35993592
SZCCHNR2026
GCA_032380995.1ContigJAUHJF000000000SAMN35993593
SZCCHNR2028
GCA_032489195.1ContigJAUEXP000000000SAMN35993594
SZCCHNR2031
GCA_032489215.1ContigJAUEXO000000000SAMN35993595
SZCCHNR2032
GCA_032489155.1ContigJAUEXN000000000SAMN35993596
SZCCHNR2034
GCA_032489175.1ContigJAUEXM000000000SAMN35993597
SZCCHNR2035
GCA_032489135.1ContigJAUEXL000000000SAMN35993598
SZCCHNR3003
GCA_032380895.1ContigJAUHJE000000000SAMN35993599
SZCCHNR3006
GCA_032380875.1ContigJAUHJD000000000SAMN35993600
SZCCHNR3007
GCA_032489115.1ContigJAUEXK000000000SAMN35993601
SZCCHNR3008
GCA_032489075.1ContigJAUEXJ000000000SAMN35993602
SZCCHNR3010
GCA_032380815.1ContigJAUHJC000000000SAMN35993603
SZCCHNR3012
GCA_032489095.1ContigJAUEXI000000000SAMN35993604
SZCCHNR3013
GCA_032489035.1ContigJAUEXH000000000SAMN35993605
SZCCHNR3014
GCA_032489055.1ContigJAUEXG000000000SAMN35993606
SZCCHNR3015
GCA_032488995.1ContigJAUEXF000000000SAMN35993607
SZCCHNR3016
GCA_032489015.1ContigJAUEXE000000000SAMN35993608
SZCCHNR3017
GCA_032488955.1ContigJAUEXD000000000SAMN35993609
SZCCHNR3020
GCA_032488975.1ContigJAUEXC000000000SAMN35993610
SZCCHNR3021
GCA_032488935.1ContigJAUEXB000000000SAMN35993611
SZCCHNR3022
GCA_032488895.1ContigJAUEXA000000000SAMN35993612
SZCCHNR3025
GCA_032380795.1ContigJAUHJB000000000SAMN35993613
SZCCHNR3027
GCA_032488915.1ContigJAUEWZ000000000SAMN35993614
SZCCHNR3028
GCA_032488875.1ContigJAUEWY000000000SAMN35993615
SZCCHNR3030
GCA_032488855.1ContigJAUEWX000000000SAMN35993616
SZCCHNR3032
GCA_032488835.1ContigJAUEWW000000000SAMN35993617
SZCCHNR3036
GCA_032488795.1ContigJAUEWV000000000SAMN35993618
SZCCHNR3037
GCA_032488815.1ContigJAUEWU000000000SAMN35993619
SZCCHNR3038
GCA_032488775.1ContigJAUEWT000000000SAMN35993620
SZCCHNR3039
GCA_032488755.1ContigJAUEWS000000000SAMN35993621
SZCCHNR3042
GCA_032488735.1ContigJAUEWR000000000SAMN35993622
SZCCHNR3043
GCA_032488695.1ContigJAUEWQ000000000SAMN35993623
SZCCHNR3044
GCA_032488715.1ContigJAUEWP000000000SAMN35993624
SZCCHNR30461
GCA_032488655.1ContigJAUEWO000000000SAMN35993625
SZCCHNR3047
GCA_032380775.1ContigJAUHJA000000000SAMN35993626
SZCCHNR3049
GCA_032488675.1ContigJAUEWN000000000SAMN35993627
SZCCHNR3050
GCA_032488635.1ContigJAUEWM000000000SAMN35993628
SZCCHNR3052
GCA_032488615.1ContigJAUEWL000000000SAMN35993629
SZCCHNR3053
GCA_032488595.1ContigJAUEWK000000000SAMN35993630
SZCCHNR3054
GCA_032488575.1ContigJAUEWJ000000000SAMN35993631
SZCCHNR3055
GCA_032488535.1ContigJAUEWI000000000SAMN35993632
SZCCHNR3056
GCA_032488555.1ContigJAUEWH000000000SAMN35993633
SZCCHNR3057
GCA_032488515.1ContigJAUEWG000000000SAMN35993634
SZCCHNR3058
GCA_032488495.1ContigJAUEWF000000000SAMN35993635
SZCCHNR3060
GCA_032488475.1ContigJAUEWE000000000SAMN35993636
SZCCHNR30611
GCA_032488455.1ContigJAUEWD000000000SAMN35993637
SZCCHNR30612
GCA_032488415.1ContigJAUEWC000000000SAMN35993638
SZCCHNR3063
GCA_032488435.1ContigJAUEWB000000000SAMN35993639
SZCCHNR3064
GCA_032380715.1ContigJAUHIZ000000000SAMN35993640
SZCCHNR3065
GCA_032488395.1ContigJAUEWA000000000SAMN35993641
SZCCHNR3068
GCA_032488375.1ContigJAUEVZ000000000SAMN35993642
SZCCHNR3070
GCA_032488355.1ContigJAUEVY000000000SAMN35993643
SZCCHNR3071
GCA_032488335.1ContigJAUEVX000000000SAMN35993644
SZCCHNR3072
GCA_032488315.1ContigJAUEVW000000000SAMN35993645
SZCCHNR3073
GCA_032488275.1ContigJAUEVV000000000SAMN35993646
SZCCHNR3075
GCA_032488295.1ContigJAUEVU000000000SAMN35993647
SZCCHNR3077
GCA_032378455.1ContigJAUHIY000000000SAMN35993648
SZCCHNR3078
GCA_032488255.1ContigJAUEVT000000000SAMN35993649
SZCCHNR3082
GCA_032488215.1ContigJAUEVS000000000SAMN35993650
SZCCHNR3084
GCA_032488235.1ContigJAUEVR000000000SAMN35993651
SZCCHNR3086
GCA_032488175.1ContigJAUEVQ000000000SAMN35993652
SZCCHNR3089
GCA_032378275.1ContigJAUHIX000000000SAMN35993653
SZCCHNR3090
GCA_032488195.1ContigJAUEVP000000000SAMN35993654
SZCCHNR3091
GCA_032488155.1ContigJAUEVO000000000SAMN35993655
SZCCHNR30921
GCA_032378175.1ContigJAUHIO000000000SAMN35993656
SZCCHNR30922
GCA_032488135.1ContigJAUEVN000000000SAMN35993657
SZCCHNR3093
GCA_032488095.1ContigJAUEVK000000000SAMN35993658
SZCCHNR3094
GCA_032488115.1ContigJAUEVM000000000SAMN35993659
SZCCHNR30941
GCA_032488075.1ContigJAUEVL000000000SAMN35993660
SZCCHNR30942
GCA_032488055.1ContigJAUEVJ000000000SAMN35993661
SZCCHNR3095
GCA_032378315.1ContigJAUHIN000000000SAMN35993662
SZCCHNR3097
GCA_032488035.1ContigJAUEVI000000000SAMN35993663
SZCCHNR30992
GCA_032487995.1ContigJAUEVH000000000SAMN35993664
SZCCHNR31011
GCA_032488015.1ContigJAUEVG000000000SAMN35993665
SZCCHNR31012
GCA_032378195.1ContigJAUHIM000000000SAMN35993666
SZCCHNR31031
GCA_032487975.1ContigJAUEVF000000000SAMN35993667
SZCCHNR31032
GCA_032487955.1ContigJAUEVE000000000SAMN35993668
SZCCHNR3104
GCA_032487915.1ContigJAUEVD000000000SAMN35993669
SZCCHNR3105
GCA_032378095.1ContigJAUHIL000000000SAMN35993670
SZCCHNR3107
GCA_032487935.1ContigJAUEVC000000000SAMN35993671
SZCCHNR3108
GCA_032378075.1ContigJAUHIK000000000SAMN35993672
SZCCHNR3109
GCA_032487895.1ContigJAUEVB000000000SAMN35993673
SZCCHNR3110
GCA_032487875.1ContigJAUEVA000000000SAMN35993674
SZCCHNR3111
GCA_032487855.1ContigJAUEUZ000000000SAMN35993675
SZCCHNR3112
GCA_032487835.1ContigJAUEUY000000000SAMN35993676
SZCCHNR31152
GCA_032487815.1ContigJAUEUX000000000SAMN35993677
SZCCHNR3116
GCA_032377935.1ContigJAUHIJ000000000SAMN35993678
SZCCHNR3117
GCA_032487795.1ContigJAUEUW000000000SAMN35993679
SZCCHNR3118
GCA_032487775.1ContigJAUEUV000000000SAMN35993680
SZCCHNR3119
GCA_032487755.1ContigJAUEUU000000000SAMN35993681
SZCCHNR31202
GCA_032487735.1ContigJAUEUT000000000SAMN35993682
SZCCHNR3123
GCA_032487695.1ContigJAUEUS000000000SAMN35993683
SZCCHNR3126
GCA_032487715.1ContigJAUEUR000000000SAMN35993684
SZCCHNR3131
GCA_032487655.1ContigJAUEUQ000000000SAMN35993685
SZCCHNR31381
GCA_032487675.1ContigJAUEUP000000000SAMN35993686
SZCCHNR31401
GCA_032487615.1ContigJAUEUO000000000SAMN35993687
SZCCHNR31402
GCA_032487635.1ContigJAUEUN000000000SAMN35993688
SZCCHNR3142
GCA_032377915.1ContigJAUHII000000000SAMN35993484
SZCCHNRI1001
GCA_032377835.1ContigJAUHIH000000000SAMN35993485
SZCCHNRI1002
GCA_032487595.1ContigJAUEUM000000000SAMN35993486
SZCCHNRI1003
GCA_032377895.1ContigJAUHIG000000000SAMN35993487
SZCCHNRI1005
GCA_032487575.1ContigJAUEUL000000000SAMN35993488
SZCCHNRI1009
GCA_032487555.1ContigJAUEUK000000000SAMN35993489
SZCCHNRI1029
GCA_032487495.1ContigJAUEUJ000000000SAMN35993490
SZCCHNRI1058
GCA_032487515.1ContigJAUEUI000000000SAMN35993491
SZCCHNRI1073
GCA_032378395.1ContigJAUHIF000000000SAMN35993492
SZCCHNRI2007
GCA_032485115.1ContigJAUEUH000000000SAMN35993493
SZCCHNRI2009
GCA_032378335.1ContigJAUHIE000000000SAMN35993494
SZCCHNRI2010
GCA_032485095.1ContigJAUEUG000000000SAMN35993495
SZCCHNRI2013
GCA_032485075.1ContigJAUEUF000000000SAMN35993496
SZCCHNRI2014
GCA_032485055.1ContigJAUEUE000000000SAMN35993497
SZCCHNRI20481
GCA_032485035.1ContigJAUEUD000000000SAMN35993498
SZCCHNRI2049
GCA_032484975.1ContigJAUEUC000000000SAMN35993499
SZCCHNRI3016
GCA_032485015.1ContigJAUEUB000000000SAMN35993500
SZCCHNRI3018
GCA_032484995.1ContigJAUEUA000000000SAMN35993501
SZCCHNRI3037
GCA_032484955.1ContigJAUETZ000000000SAMN35993502
SZCCHNRI3042
GCA_032377735.1ContigJAUHID000000000SAMN35993503
SZCCHNRI3043
GCA_032484915.1ContigJAUETY000000000SAMN35993504
SZCCHNRI30511
GCA_032484935.1ContigJAUETX000000000SAMN35993505
SZCCHNRI30512
GCA_032484895.1ContigJAUETW000000000SAMN35993506
SZCCHNRI3052
GCA_032484875.1ContigJAUETV000000000SAMN35993507
SZCCHNS1008
GCA_032484855.1ContigJAUETU000000000SAMN35993508
SZCCHNS1012
GCA_032484835.1ContigJAUETT000000000SAMN35993509
SZCCHNS1022
GCA_032484775.1ContigJAUETS000000000SAMN35993510
SZCCHNS1049
GCA_032484785.1ContigJAUETR000000000SAMN35993511
SZCCHNS1050
GCA_032484815.1ContigJAUETQ000000000SAMN35993512
SZCCHNS1054
GCA_032484755.1ContigJAUETP000000000SAMN35993513
SZCCHNS2002
GCA_032378235.1ContigJAUHIC000000000SAMN35993514
SZCCHNS2005
GCA_032484735.1ContigJAUETO000000000SAMN35993515
SZCCHNS2006
GCA_032377715.1ContigJAUHIB000000000SAMN35993516
SZCCHNS2015
GCA_032484715.1ContigJAUETN000000000SAMN35993517
SZCCHNS2017
GCA_032377635.1ContigJAUHIA000000000SAMN35993518
SZCCHNS2021
GCA_032377575.1ContigJAUHHZ000000000SAMN35993519
SZCCHNS2022
GCA_032484675.1ContigJAUETM000000000SAMN35993520
SZCCHNS2096
GCA_032377435.1ContigJAUHHY000000000SAMN35993521
SZCCHNS3002
GCA_032484695.1ContigJAUETL000000000SAMN35993522
SZCCHNS3003
GCA_032484655.1ContigJAUETK000000000SAMN35993523
SZCCHNS3004
GCA_032484635.1ContigJAUETJ000000000SAMN35993524
SZCCHNS30051
GCA_032484575.1ContigJAUETI000000000SAMN35993525
SZCCHNS30052
GCA_032484595.1ContigJAUETH000000000SAMN35993526
SZCCHNS30121
GCA_032484615.1ContigJAUETG000000000SAMN35993527
SZCCHNS30122
GCA_032484555.1ContigJAUETF000000000SAMN35993528
SZCCHNS3014
GCA_032484535.1ContigJAUETE000000000SAMN35993529
SZCCHNS3016
GCA_032484515.1ContigJAUETD000000000SAMN35993530
SZCCHNS3018
GCA_032484475.1ContigJAUETC000000000SAMN35993531
SZCCHNS3051
GCA_032484495.1ContigJAUETB000000000SAMN35993532
SZCCHNS3052
GCA_032484455.1ContigJAUETA000000000SAMN35993533
SZCCHNS3053
GCA_032377455.1ContigJAUHHX000000000SAMN35993534
SZCCHNS3055
GCA_032484435.1ContigJAUESZ000000000SAMN35993535
SZCCHNS30571
GCA_032484415.1ContigJAUESY000000000SAMN35993536
SZCCHNS30572
GCA_032484395.1ContigJAUESX000000000SAMN35993537
SZCCHNS30581
GCA_032484375.1ContigJAUESW000000000SAMN35993538
SZCCHNS30582
GCA_032484335.1ContigJAUESV000000000SAMN35993539
SZCCHNS30591
GCA_032484355.1ContigJAUESU000000000SAMN35993540
SZCCHNS30592
SRA Data Details
ParameterValue
Data volume, Gbases276
Data volume, Tbytes0.22

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center