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Accession: PRJNA878823 ID: 878823

Total of 87 sampled plants of 15 species from the clade including cultivated tomato and its wild relatives (Solanum Sect. Lycopersicon)

Genotyping by sequencing of 53 accessions of cultivated tomato and 14 species of its wild relatives (Solanum Sect. Lycopersicon) to develop SNP markers and estimate phylogenetic relationships among taxa.
AccessionPRJNA878823
Data TypeRaw sequence reads
ScopeMultispecies
Publications
  • Published online: Barnett J et al., "Evidence of fruit syndromes in the recently diverged wild tomato clade opens new possibilities for the study of fleshy fruit evolution", PLANTS, PEOPLE, PLANET, 2023;
Grants
  • "Exploitation of Genetic and Epigenetic Variation in the Regulation of Tomato Fruit Quality Traits" (Grant ID 1564366, National Science Foundation)
SubmissionRegistration date: 9-Sep-2022
University of Massachusetts Amherst
RelevanceEvolution
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments87
Other datasets
BioSample87
SRA Data Details
ParameterValue
Data volume, Gbases120
Data volume, Mbytes50607

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