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Accession: PRJNA302255 ID: 302255

Arabidopsis thaliana (thale cress)

Arabidopsis thaliana Genome sequencing and assembly

See Genome Information for Arabidopsis thaliana
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7329 additional projects are related by organism.
Genome sequence of the A. thaliana ecotype/accession Niederzenz (Nd-1), different from the referenve (Col-0). Generated by de novo sequencing.
AccessionPRJNA302255
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismArabidopsis thaliana[Taxonomy ID: 3702]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana
PublicationsPucker B et al., "A De Novo Genome Sequence Assembly of the Arabidopsis thaliana Accession Niederzenz-1 Displays Presence/Absence Variation and Strong Synteny.", PLoS One, 2016;11(10):e0164321
SubmissionRegistration date: 23-Sep-2016
Bielefeld University, CeBiTec & Department of Biology
NCBI Links
RelevanceModel Organism
Locus Tag PrefixAS191
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)497
WGS master1
SRA Experiments9
Publications
PubMed1
PMC1
Other datasets
BioSample1
Assembly1
Assembly details:
AssemblyLevelWGSBioSampleTaxonomy
GCA_001742845.1ScaffoldLXSY00000000SAMN04270984
Arabidopsis thaliana
SRA Data Details
ParameterValue
Data volume, Gbases81
Data volume, Tbytes0.16

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