De novo reference assembly for the coppery titi monkey (Plecturocebus cupreus) generated using three orthologous sequencing technologies (Oxford Nanopore long-read sequencing, 10x Genomics linked-read sequencing, and Illumina short-read sequencing), and scaffolded using Dovetail Genomics Hi-C reads.
| Accession | PRJNA1068557 |
| Data Type | Genome sequencing |
| Scope | Multispecies |
| Publications | Pfeifer SP et al., "De Novo Genome Assembly for the Coppery Titi Monkey (Plecturocebus cupreus): An Emerging Nonhuman Primate Model for Behavioral Research.", Genome Biol Evol, 2024 May 2;16(5) |
| Grants | - "California National Primate Research Center" (Grant ID P51 OD011107, Office of the Director)
- "CAREER: Characterizing the rates and patterns of mutation and recombination in Old and New World monkeys" (Grant ID DEB-2045343, National Science Foundation)
- "Kappa opioid and oxytocin interactions in social buffering and separation" (Grant ID R01 MH125411, National Institute of Mental Health)
- "Characterizing the full spectrum of genomic variation in biomedically-relevant primates" (Grant ID R35 GM151008, National Institute of General Medical Sciences)
- "THE NEURAL BASIS OF PAIR-BONDING IN FEMALE TITI MONKEYS" (Grant ID R01 HD092055, National Institute of Child Health & Human Development)
|
| Submission | Registration date: 24-Jan-2024
Arizona State University |
| Relevance | Behavior and Evolution |
| Locus Tag Prefix | AAY473 |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 260 |
| WGS master | 1 |
| Protein Sequences | 40319 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 1 |
| Assembly | 1 |