marine metagenome (ID 422537) - BioProject

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Accession: PRJDB5792 ID: 422537

marine metagenome

Metagenomics of BMS sulfide deposits

Shotgun metagenomic sequences were obtained from sub-seafloor massive sulfide deposits to reconstruct genomes of yet-uncultivated microbes.

Accession	PRJDB5792
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	marine metagenome[Taxonomy ID: 408172] unclassified sequences; metagenomes; ecological metagenomes; marine metagenome
Publications	Kato S et al., "Genome-enabled metabolic reconstruction of dominant chemosynthetic colonizers in deep-sea massive sulfide deposits.", Environ Microbiol, 2018 Feb;20(2):862-877
Submission	Registration date: 14-Dec-2017 JAMSTEC
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	12016
WGS master	68
SRA Experiments	5
Protein Sequences	125904
Publications
PubMed	1
Other datasets
BioSample	73
Assembly	68

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

68
68

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_036985995.1	BTQS00000000	SAMD00641665	BMS9Abin20	Acidimicrobiia bacterium
GCA_036985935.1	BTQP00000000	SAMD00641662	BMS9Abin17	Acidimicrobiia bacterium
GCA_036985855.1	BTQL00000000	SAMD00641658	BMS9Abin12	Acidimicrobiia bacterium
GCA_036985755.1	BTQG00000000	SAMD00641653	BMS9Abin07	Acidimicrobiia bacterium
GCA_036986295.1	BTRH00000000	SAMD00641680	BMS9Abin37	Acidobacteriota bacterium
GCA_036985655.1	BTQB00000000	SAMD00641648	BMS9Abin02	Anaerolineae bacterium
GCA_036986135.1	BTQZ00000000	SAMD00641672	BMS9Abin28	Anaerolineae bacterium
GCA_036985635.1	BTQA00000000	SAMD00641647	BMS9Abin01	Gammaproteobacteria bacterium
GCA_036985895.1	BTQN00000000	SAMD00641660	BMS9Abin14	Gammaproteobacteria bacterium
GCA_036985915.1	BTQO00000000	SAMD00641661	BMS9Abin15	Gammaproteobacteria bacterium
GCA_036985835.1	BTQK00000000	SAMD00641657	BMS9Abin11	Gammaproteobacteria bacterium
GCA_036985775.1	BTQH00000000	SAMD00641654	BMS9Abin08	Gammaproteobacteria bacterium
GCA_036985795.1	BTQI00000000	SAMD00641655	BMS9Abin09	Gammaproteobacteria bacterium
GCA_036985815.1	BTQJ00000000	SAMD00641656	BMS9Abin10	Gammaproteobacteria bacterium
GCA_036985735.1	BTQF00000000	SAMD00641652	BMS9Abin06	Gammaproteobacteria bacterium
GCA_036986095.1	BTQX00000000	SAMD00641670	BMS9Abin25	Gammaproteobacteria bacterium
GCA_036985975.1	BTQR00000000	SAMD00641664	BMS9Abin19	Gammaproteobacteria bacterium
GCA_036986035.1	BTQU00000000	SAMD00641667	BMS9Abin22	Gammaproteobacteria bacterium
GCA_036986235.1	BTRE00000000	SAMD00641677	BMS9Abin33	Gammaproteobacteria bacterium
GCA_036986175.1	BTRB00000000	SAMD00641674	BMS9Abin30	Gammaproteobacteria bacterium
GCA_036986115.1	BTQY00000000	SAMD00641671	BMS9Abin26	Gammaproteobacteria bacterium
GCA_036986215.1	BTRD00000000	SAMD00641676	BMS9Abin32	Gammaproteobacteria bacterium
GCA_036986195.1	BTRC00000000	SAMD00641675	BMS9Abin31	Gammaproteobacteria bacterium
GCA_036986275.1	BTRG00000000	SAMD00641679	BMS9Abin36	Gammaproteobacteria bacterium
GCA_036986155.1	BTRA00000000	SAMD00641673	BMS9Abin29	Gemmatimonadota bacterium
GCA_036986315.1	BTRI00000000	SAMD00641681	BMS9Abin39	Ignavibacteria bacterium
GCA_036985875.1	BTQM00000000	SAMD00641659	BMS9Abin13	Patescibacteria group bacterium
GCA_036986255.1	BTRF00000000	SAMD00641678	BMS9Abin34	Patescibacteria group bacterium
GCA_036985695.1	BTQD00000000	SAMD00641650	BMS9Abin04	Planctomycetia bacterium
GCA_036985715.1	BTQE00000000	SAMD00641651	BMS9Abin05	Rhodothermia bacterium
GCA_036985675.1	BTQC00000000	SAMD00641649	BMS9Abin03	Thermodesulfobacteriota bacterium
GCA_036986075.1	BTQW00000000	SAMD00641669	BMS9Abin24	Thermodesulfobacteriota bacterium
GCA_036986055.1	BTQV00000000	SAMD00641668	BMS9Abin23	Thermodesulfobacteriota bacterium
GCA_036986015.1	BTQT00000000	SAMD00641666	BMS9Abin21	Thermodesulfovibrionia bacterium
GCA_036985955.1	BTQQ00000000	SAMD00641663	BMS9Abin18	Zetaproteobacteria bacterium
GCA_002923215.1	BDTI00000000	SAMD00081376	BMS3Abin16	archaeon BMS3Abin16
GCA_002897655.1	BDTJ00000000	SAMD00081377	BMS3Abin17	archaeon BMS3Abin17
GCA_002897955.1	BDTY00000000	SAMD00081392	BMS3Bbin15	archaeon BMS3Bbin15
GCA_002898035.1	BDTZ00000000	SAMD00081393	BMS3Bbin16	archaeon BMS3Bbin16
GCA_002897715.1	BDUA00000000	SAMD00081361	BMS3Abin01	bacterium BMS3Abin01
GCA_002897675.1	BDSU00000000	SAMD00081362	BMS3Abin02	bacterium BMS3Abin02
GCA_002898075.1	BDSV00000000	SAMD00081363	BMS3Abin03	bacterium BMS3Abin03
GCA_002898175.1	BDSW00000000	SAMD00081364	BMS3Abin04	bacterium BMS3Abin04
GCA_002898095.1	BDSX00000000	SAMD00081365	BMS3Abin05	bacterium BMS3Abin05
GCA_002897895.1	BDSY00000000	SAMD00081366	BMS3Abin06	bacterium BMS3Abin06
GCA_002897815.1	BDSZ00000000	SAMD00081367	BMS3Abin07	bacterium BMS3Abin07
GCA_002897935.1	BDTA00000000	SAMD00081368	BMS3Abin08	bacterium BMS3Abin08
GCA_002898055.1	BDTB00000000	SAMD00081369	BMS3Abin09	bacterium BMS3Abin09
GCA_002897755.1	BDTC00000000	SAMD00081370	BMS3Abin10	bacterium BMS3Abin10
GCA_002897635.1	BDTD00000000	SAMD00081371	BMS3Abin11	bacterium BMS3Abin11
GCA_002897835.1	BDTE00000000	SAMD00081372	BMS3Abin12	bacterium BMS3Abin12
GCA_002897975.1	BDTF00000000	SAMD00081373	BMS3Abin13	bacterium BMS3Abin13
GCA_002897695.1	BDTG00000000	SAMD00081374	BMS3Abin14	bacterium BMS3Abin14
GCA_002923195.1	BDTH00000000	SAMD00081375	BMS3Abin15	bacterium BMS3Abin15
GCA_002923235.1	BDTK00000000	SAMD00081378	BMS3Bbin01	bacterium BMS3Bbin01
GCA_002898115.1	BDTL00000000	SAMD00081379	BMS3Bbin02	bacterium BMS3Bbin02
GCA_002898015.1	BDTM00000000	SAMD00081380	BMS3Bbin03	bacterium BMS3Bbin03
GCA_002898195.1	BDTN00000000	SAMD00081381	BMS3Bbin04	bacterium BMS3Bbin04
GCA_002897855.1	BDTO00000000	SAMD00081382	BMS3Bbin05	bacterium BMS3Bbin05
GCA_002897875.1	BDTP00000000	SAMD00081383	BMS3Bbin06	bacterium BMS3Bbin06
GCA_002898135.1	BDTQ00000000	SAMD00081384	BMS3Bbin07	bacterium BMS3Bbin07
GCA_002897775.1	BDTR00000000	SAMD00081385	BMS3Bbin08	bacterium BMS3Bbin08
GCA_002897915.1	BDTS00000000	SAMD00081386	BMS3Bbin09	bacterium BMS3Bbin09
GCA_002897995.1	BDTT00000000	SAMD00081387	BMS3Bbin10	bacterium BMS3Bbin10
GCA_002898155.1	BDTU00000000	SAMD00081388	BMS3Bbin11	bacterium BMS3Bbin11
GCA_002897795.1	BDTV00000000	SAMD00081389	BMS3Bbin12	bacterium BMS3Bbin12
GCA_002897735.1	BDTW00000000	SAMD00081390	BMS3Bbin13	bacterium BMS3Bbin13
GCA_002897615.1	BDTX00000000	SAMD00081391	BMS3Bbin14	bacterium BMS3Bbin14

SRA Data Details

Parameter	Value
Data volume, Gbases	38
Data volume, Mbytes	20130

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marine metagenome

Metagenomics of BMS sulfide deposits

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