Borrelia sp. (ID 431102) - BioProject

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Accession: PRJNA431102 ID: 431102

Borrelia sp.

Genome sequencing of multiple Borrelia sensu lato isolates

Genome sequencing of multiple Borrelia sensu lato isolates spanning the world-wide range of genetic and epidemiological diversity of this clinically-important bacterial clade.

Accession	PRJNA431102
Data Type	Genome sequencing and assembly
Scope	Multispecies
Grants	"Host, Pathogen, and the Microbiome: Determinants of Infectious Disease Outcome" (Grant ID U19 AI110820, National Institute of Allergy and Infectious Diseases Extramural Activities)
Submission	Registration date: 22-Jan-2018 Institute for Genome Sciences
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (Genomic DNA)	187
SRA Experiments	30
Protein Sequences	42880
Other datasets
BioSample	49
Assembly	46

Assembly details:

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Assembly level

Number of Assemblies

Complete genome

Chromosome

Total

42
4
46

Assembly	Chrs	BioSample	Strain	Taxonomy
GCA_030440275.1	4	SAMN10141390	CA_690	Borrelia sp. CA_690
GCA_032595795.1	4	SAMN10141353	SCW30h	Borreliella americana
GCA_030445085.1	4	SAMN10141354	SCW41	Borreliella americana
GCA_032595875.1	4	SAMN34060371	21038	Borreliella andersonii
GCA_032595975.1	4	SAMN34060372	MOD-5	Borreliella andersonii
GCA_032595555.1	4	SAMN10141356	M7p	Borreliella bissettiae
GCA_030439775.1	4	SAMN10141355	Pgeb	Borreliella bissettiae
GCA_030439665.1	4	SAMN10141361	80a	Borreliella burgdorferi
GCA_030439625.1	4	SAMN10141366	NE_5267	Borreliella burgdorferi
GCA_030439605.1	4	SAMN10141357	Am293	Borreliella burgdorferi
GCA_030440345.1	4	SAMN10141368	Sh-2-82	Borreliella burgdorferi
GCA_030445065.1	4	SAMN10141358	Am315	Borreliella burgdorferi
GCA_030445025.1	4	SAMN10141364	NE_5248	Borreliella burgdorferi
GCA_030445005.1	4	SAMN10141365	NE_5261	Borreliella burgdorferi
GCA_030444985.1	4	SAMN10141359	Am388	Borreliella burgdorferi
GCA_032595535.1	4	SAMN10141367	SCW_9	Borreliella burgdorferi
GCA_032595515.1	4	SAMN10141362	Bol29	Borreliella burgdorferi
GCA_032595755.1	4	SAMN10141369	Z9	Borreliella burgdorferi
GCA_032595375.1	4	SAMN10141363	Fr93	Borreliella burgdorferi
GCA_032597935.1	4	SAMN34060370	CA446	Borreliella californiensis
GCA_030438475.1	4	SAMN10141370	CA443	Borreliella californiensis
GCA_032595855.1	4	SAMN34060374	MI-3	Borreliella carolinensis
GCA_032595915.1	3	SAMN34060367	SCW-22	Borreliella carolinensis
GCA_032595775.1	4	SAMN35100056	BUL-H-2	Borreliella carolinensis
GCA_030440315.2	4	SAMN10141371	SCGT-18	Borreliella carolinensis
GCA_030438365.1	4	SAMN10141372	Z11	Borreliella finlandensis
GCA_030438275.1	4	SAMN10141373	H014	Borreliella japonica
GCA_030438115.1	4	SAMN10141374	Miyazaki2E	Borreliella japonica
GCA_030437945.1	4	SAMN10141375	25015	Borreliella kurtenbachii
GCA_030437705.1	4	SAMN10141376	CA-28-91	Borreliella lanei
GCA_030440365.1	4	SAMN10141377	PotiB2	Borreliella lusitaniae
GCA_032595895.1	4	SAMN34060369	PoHL-1	Borreliella lusitaniae
GCA_032595955.1	4	SAMN34060368	PotiB3	Borreliella lusitaniae
GCA_033969665.1	4	SAMN34060373	CMN3	Borreliella sinica
GCA_030436445.1	4	SAMN10141378	Pmew	Borreliella spielmanii
GCA_030436345.1	4	SAMN10141379	HK501	Borreliella tanukii
GCA_030439725.1	4	SAMN10141380	Koshiki4E	Borreliella tanukii
GCA_030439705.1	4	SAMN10141381	TanegashimaAS9	Borreliella tanukii
GCA_030439745.1	4	SAMN10141382	TanegashimaAS13	Borreliella tanukii
GCA_030439285.1	4	SAMN10141384	Ya501	Borreliella turdi
GCA_030439295.1	4	SAMN10141383	047-3	Borreliella turdi
GCA_030436405.1	4	SAMN10141386	Am501	Borreliella valaisiana
GCA_030437035.1	4	SAMN10141385	100B40	Borreliella valaisiana
GCA_030436205.1	4	SAMN10141389	Miyako4E3	Borreliella yangtzensis
GCA_030436185.1	4	SAMN10141387	CW61	Borreliella yangtzensis
GCA_030436165.1	4	SAMN10141388	CW62	Borreliella yangtzensis

SRA Data Details

Parameter	Value
Data volume, Gbases	81
Data volume, Tbytes	0.28

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Borrelia sp.

Genome sequencing of multiple Borrelia sensu lato isolates

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