Saccharomyces cerevisiae reference assembly panel ... (ID 930305) - BioProject

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Accession: PRJEB59413 ID: 930305

Saccharomyces cerevisiae reference assembly panel (ScRAP). Unphased nuclear assemblies.

Nanopore and illumina read sequencing of a diverse set of Saccharomyces cerevisiae strains for de-novo assemblies. Unphased nuclear assemblies.

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This project is a component of the Saccharomyces cerevisiae reference assembly panel (ScRAP)

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4 additional projects are components of the Saccharomyces cerevisiae reference assembly panel (ScRAP).

A diverse set of Saccharomyces cerevisiae strains were selected based on unique features such as phylogenetic position, heterozygosity, ploidy etc and sequenced both with Nanopore and Illumina technology in order to generate accurate de-novo assemblies for each strain. Unphased nuclear assemblies.

Accession	PRJEB59413
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Submission	Registration date: 1-Feb-2023 ibps sorbonne universite
Locus Tag Prefix	LOCUSTAGX

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	2014
WGS master	118
Protein Sequences	678662
Other datasets
BioSample	118
Assembly	118

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

44
74
118

Assembly	WGS	BioSample	Taxonomy
GCA_949124395.1	CASBKF000000000	SAMEA12946369	Saccharomyces cerevisiae
GCA_949124115.1	CASBKN000000000	SAMEA12946383	Saccharomyces cerevisiae
GCA_949124205.1	CASBLF000000000	SAMEA12946385	Saccharomyces cerevisiae
GCA_949124105.1	CASBKM000000000	SAMEA12946374	Saccharomyces cerevisiae
GCA_949124185.1	CASBJY000000000	SAMEA112135655	Saccharomyces cerevisiae
GCA_949124285.1	CASBJX000000000	SAMEA12946376	Saccharomyces cerevisiae
GCA_949124305.1	CASBKI000000000	SAMEA12946358	Saccharomyces cerevisiae
GCA_949124405.1	CASBKT000000000	SAMEA12946366	Saccharomyces cerevisiae
GCA_949124165.1	CASBKY000000000	SAMEA112135654	Saccharomyces cerevisiae
GCA_949124225.1	CASBKP000000000	SAMEA12946356	Saccharomyces cerevisiae
GCA_949124375.1	CASBLG000000000	SAMEA112135650	Saccharomyces cerevisiae
GCA_949124145.1	CASBKA000000000	SAMEA112135652	Saccharomyces cerevisiae
GCA_949124275.1	CASBLI000000000	SAMEA12946362	Saccharomyces cerevisiae
GCA_949124415.1	CASBLB000000000	SAMEA12946384	Saccharomyces cerevisiae
GCA_949124135.1	CASBLE000000000	SAMEA12946364	Saccharomyces cerevisiae
GCA_949124435.1	CASBLH000000000	SAMEA12946373	Saccharomyces cerevisiae
GCA_949124245.1	CASBKH000000000	SAMEA12946367	Saccharomyces cerevisiae
GCA_949124045.1	CASBLA000000000	SAMEA12946368	Saccharomyces cerevisiae
GCA_949124255.1	CASBKL000000000	SAMEA12946375	Saccharomyces cerevisiae
GCA_949124215.1	CASBKD000000000	SAMEA112135651	Saccharomyces cerevisiae
GCA_949124325.1	CASBKK000000000	SAMEA112135649	Saccharomyces cerevisiae
GCA_949124295.1	CASBKV000000000	SAMEA12946360	Saccharomyces cerevisiae
GCA_949124365.1	CASBKG000000000	SAMEA12946371	Saccharomyces cerevisiae
GCA_949124235.1	CASBKC000000000	SAMEA12946361	Saccharomyces cerevisiae
GCA_949124055.1	CASBKU000000000	SAMEA112135653	Saccharomyces cerevisiae
GCA_949124315.1	CASBKZ000000000	SAMEA112135667	Saccharomyces cerevisiae
GCA_949124565.1	CASBNE000000000	SAMEA12946407	Saccharomyces cerevisiae
GCA_949124195.1	CASBLC000000000	SAMEA12946379	Saccharomyces cerevisiae
GCA_949124155.1	CASBJZ000000000	SAMEA12946381	Saccharomyces cerevisiae
GCA_949124335.1	CASBKW000000000	SAMEA12946357	Saccharomyces cerevisiae
GCA_949124075.1	CASBKR000000000	SAMEA12946365	Saccharomyces cerevisiae
GCA_949125025.1	CASBPC000000000	SAMEA112135664	Saccharomyces cerevisiae
GCA_949124785.1	CASBND000000000	SAMEA12946409	Saccharomyces cerevisiae
GCA_949124915.1	CASBOK000000000	SAMEA12946440	Saccharomyces cerevisiae
GCA_949124555.1	CASBMF000000000	SAMEA12946416	Saccharomyces cerevisiae
GCA_949124525.1	CASBMH000000000	SAMEA112135660	Saccharomyces cerevisiae
GCA_949124805.1	CASBNL000000000	SAMEA12946406	Saccharomyces cerevisiae
GCA_949124585.1	CASBNI000000000	SAMEA112135656	Saccharomyces cerevisiae
GCA_949124855.1	CASBNO000000000	SAMEA12946395	Saccharomyces cerevisiae
GCA_949124345.1	CASBKQ000000000	SAMEA12946370	Saccharomyces cerevisiae
GCA_949124355.1	CASBKX000000000	SAMEA12946359	Saccharomyces cerevisiae
GCA_949124385.1	CASBKE000000000	SAMEA12946378	Saccharomyces cerevisiae
GCA_949124425.1	CASBKJ000000000	SAMEA12946382	Saccharomyces cerevisiae
GCA_949124095.1	CASBKB000000000	SAMEA12946372	Saccharomyces cerevisiae
GCA_949124265.1	CASBKS000000000	SAMEA12946363	Saccharomyces cerevisiae
GCA_949124125.1	CASBLD000000000	SAMEA12946380	Saccharomyces cerevisiae
GCA_949124175.1	CASBKO000000000	SAMEA12946377	Saccharomyces cerevisiae
GCA_949124945.1	CASBPB000000000	SAMEA112135665	Saccharomyces cerevisiae
GCA_949124735.1	CASBNQ000000000	SAMEA13011150	Saccharomyces cerevisiae
GCA_949125275.1	CASBNZ000000000	SAMEA12946428	Saccharomyces cerevisiae
GCA_949124885.1	CASBOA000000000	SAMEA12946429	Saccharomyces cerevisiae
GCA_949124775.1	CASBMG000000000	SAMEA112135657	Saccharomyces cerevisiae
GCA_949124795.1	CASBNR000000000	SAMEA12946411	Saccharomyces cerevisiae
GCA_949124695.1	CASBMZ000000000	SAMEA112135661	Saccharomyces cerevisiae
GCA_949125415.1	CASBOD000000000	SAMEA12946438	Saccharomyces cerevisiae
GCA_949124725.1	CASBMM000000000	SAMEA12946401	Saccharomyces cerevisiae
GCA_949125765.1	CASBOB000000000	SAMEA12946445	Saccharomyces cerevisiae
GCA_949125285.1	CASBNT000000000	SAMEA12946435	Saccharomyces cerevisiae
GCA_949125735.1	CASBPF000000000	SAMEA112135662	Saccharomyces cerevisiae
GCA_949124595.1	CASBNB000000000	SAMEA12946389	Saccharomyces cerevisiae
GCA_949124475.1	CASBMQ000000000	SAMEA12946417	Saccharomyces cerevisiae
GCA_949124685.1	CASBNH000000000	SAMEA12946408	Saccharomyces cerevisiae
GCA_949126085.1	CASBPE000000000	SAMEA112135666	Saccharomyces cerevisiae
GCA_949124645.1	CASBMW000000000	SAMEA12946402	Saccharomyces cerevisiae
GCA_949124655.1	CASBMV000000000	SAMEA12946415	Saccharomyces cerevisiae
GCA_949124755.1	CASBML000000000	SAMEA12946403	Saccharomyces cerevisiae
GCA_949124895.1	CASBOE000000000	SAMEA12946448	Saccharomyces cerevisiae
GCA_949124665.1	CASBNA000000000	SAMEA12946413	Saccharomyces cerevisiae
GCA_949125565.1	CASBOG000000000	SAMEA12946426	Saccharomyces cerevisiae
GCA_949124615.1	CASBNN000000000	SAMEA12946390	Saccharomyces cerevisiae
GCA_949124825.1	CASBME000000000	SAMEA12946396	Saccharomyces cerevisiae
GCA_949124535.1	CASBNC000000000	SAMEA12946400	Saccharomyces cerevisiae
GCA_949125035.1	CASBOS000000000	SAMEA12946432	Saccharomyces cerevisiae
GCA_949124935.1	CASBNW000000000	SAMEA12946431	Saccharomyces cerevisiae
GCA_949125895.1	CASBOZ000000000	SAMEA12946434	Saccharomyces cerevisiae
GCA_949125245.1	CASBOY000000000	SAMEA12946394	Saccharomyces cerevisiae
GCA_949125335.1	CASBOO000000000	SAMEA12946439	Saccharomyces cerevisiae
GCA_949125775.1	CASBON000000000	SAMEA12946436	Saccharomyces cerevisiae
GCA_949124485.1	CASBMP000000000	SAMEA12946393	Saccharomyces cerevisiae
GCA_949125295.1	CASBPA000000000	SAMEA12946450	Saccharomyces cerevisiae
GCA_949124705.1	CASBNK000000000	SAMEA12946412	Saccharomyces cerevisiae
GCA_949125665.1	CASBOH000000000	SAMEA12946421	Saccharomyces cerevisiae
GCA_949125785.1	CASBPD000000000	SAMEA12946446	Saccharomyces cerevisiae
GCA_949124625.1	CASBMT000000000	SAMEA12946391	Saccharomyces cerevisiae
GCA_949124635.1	CASBMK000000000	SAMEA112135658	Saccharomyces cerevisiae
GCA_949124745.1	CASBMS000000000	SAMEA12946405	Saccharomyces cerevisiae
GCA_949124845.1	CASBNP000000000	SAMEA12946418	Saccharomyces cerevisiae
GCA_949124495.1	CASBNG000000000	SAMEA12946404	Saccharomyces cerevisiae
GCA_949125905.1	CASBOX000000000	SAMEA12946422	Saccharomyces cerevisiae
GCA_949124905.1	CASBOV000000000	SAMEA12946442	Saccharomyces cerevisiae
GCA_949124875.1	CASBOP000000000	SAMEA12946443	Saccharomyces cerevisiae
GCA_949124605.1	CASBMY000000000	SAMEA112135668	Saccharomyces cerevisiae
GCA_949124715.1	CASBMO000000000	SAMEA12946399	Saccharomyces cerevisiae
GCA_949125725.1	CASBOL000000000	SAMEA12946433	Saccharomyces cerevisiae
GCA_949125375.1	CASBOF000000000	SAMEA12946444	Saccharomyces cerevisiae
GCA_949125475.1	CASBNV000000000	SAMEA112135669	Saccharomyces cerevisiae
GCA_949126015.1	CASBNY000000000	SAMEA12946447	Saccharomyces cerevisiae
GCA_949124575.1	CASBNF000000000	SAMEA12946386	Saccharomyces cerevisiae
GCA_949124925.1	CASBOT000000000	SAMEA12946420	Saccharomyces cerevisiae
GCA_949125505.1	CASBNS000000000	SAMEA12946424	Saccharomyces cerevisiae
GCA_949125125.1	CASBOI000000000	SAMEA112135670	Saccharomyces cerevisiae
GCA_949124955.1	CASBNU000000000	SAMEA12946423	Saccharomyces cerevisiae
GCA_949124965.1	CASBOC000000000	SAMEA12946419	Saccharomyces cerevisiae
GCA_949125675.1	CASBOR000000000	SAMEA12946437	Saccharomyces cerevisiae
GCA_949125365.1	CASBOJ000000000	SAMEA12946430	Saccharomyces cerevisiae
GCA_949124865.1	CASBNX000000000	SAMEA112135663	Saccharomyces cerevisiae
GCA_949125345.1	CASBOU000000000	SAMEA12946441	Saccharomyces cerevisiae
GCA_949124835.1	CASBMI000000000	SAMEA12946392	Saccharomyces cerevisiae
GCA_949125495.1	CASBOW000000000	SAMEA12946425	Saccharomyces cerevisiae
GCA_949124815.1	CASBMU000000000	SAMEA12946410	Saccharomyces cerevisiae
GCA_949124505.1	CASBMJ000000000	SAMEA112135659	Saccharomyces cerevisiae
GCA_949124545.1	CASBNJ000000000	SAMEA12946388	Saccharomyces cerevisiae
GCA_949124765.1	CASBNM000000000	SAMEA12946387	Saccharomyces cerevisiae
GCA_949125755.1	CASBOQ000000000	SAMEA12946449	Saccharomyces cerevisiae
GCA_949124675.1	CASBMX000000000	SAMEA12946414	Saccharomyces cerevisiae
GCA_949124465.1	CASBMR000000000	SAMEA12946398	Saccharomyces cerevisiae
GCA_949124515.1	CASBMN000000000	SAMEA12946397	Saccharomyces cerevisiae
GCA_949126065.1	CASBOM000000000	SAMEA12946427	Saccharomyces cerevisiae

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Saccharomyces cerevisiae reference assembly panel (ScRAP). Unphased nuclear assemblies.

Nanopore and illumina read sequencing of a diverse set of Saccharomyces cerevisiae strains for de-novo assemblies. Unphased nuclear assemblies.

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