lichen metagenome (ID 833438) - BioProject

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Accession: PRJNA833438 ID: 833438

lichen metagenome

Lichinomycetes genomes

Genome sequences from different classes in Ascomycota, including Lichinomycetes, Lecanoromycetes, Arthoniomycete and Dothideomycetes, which were used in a comparative study of genomic functional annotations to trace an ancestral symbiotic origin within Dothidiomycota.

Accession	PRJNA833438
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	lichen metagenome[Taxonomy ID: 1653169] unclassified sequences; metagenomes; organismal metagenomes; lichen metagenome
Submission	Registration date: 7-Nov-2022 University of Alberta
Relevance	Evolution

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	16906
WGS master	30
SRA Experiments	30
Protein Sequences	243102
Other datasets
BioSample	60
Assembly	30

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

6
24
30

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_026054675.1	JAPETI000000000	SAMN27762803	Spribille s.n. 20.09.2020/TS-e1968	Alyxoria varia
GCA_026054635.1	JAPETK000000000	SAMN27762795	Aptroot 80730/TS-e1945	Bathelium mastoideum
GCA_026023875.1	JAPETJ000000000	SAMN27762794	Aptroot 80729/TS-e1944	Bathelium mastoideum
GCA_026027345.1	JAPETL000000000	SAMN27762793	Aptroot 77511/TS-e1943	Bogoriella megaspora
GCA_026023835.1	JAPETM000000000	SAMN27762790	JK 8506/TS-e1937	Caeruleum heppii
GCA_026023815.1	JAPETN000000000	SAMN27762777	Spribille 42405/TS-e1880	Candelaria pacifica
GCA_026023805.1	JAPETP000000000	SAMN27762781	AC779/DDE408	Candelina mexicana
GCA_026023795.1	JAPETO000000000	SAMN27762780	AH-540/DDE406	Candelina submexicana
GCA_026023695.1	JAPETQ000000000	SAMN27762776	Spribille 41657/TS-e1856-1857(pooled)	Chaenotheca gracillima
GCA_026023555.1	JAPETR000000000	SAMN27762800	Spribille s.n. 12.05.2019/TS-e1954	Chrysothrix sp. TS-e1954
GCA_026023565.1	JAPETS000000000	SAMN27762779	CBS125236	Cirrosporium novae-zelandiae
GCA_026023515.1	JAPETT000000000	SAMN27762791	Spribille 43310/TS-e1940	Claussenomyces sp. TS43310
GCA_026023525.1	JAPETU000000000	SAMN27762785	MO 308433/TS-e1929	Geoglossum simile
GCA_026024515.1	JAPETV000000000	SAMN27762784	MO 234205/TS-e1927	Geoglossum umbratile
GCA_026054655.1	JAPETW000000000	SAMN27762788	Spribille 39809/TS-e1935	Lichina confinis
GCA_026054615.1	JAPETX000000000	SAMN27762789	Spribille 41687/TS-e1936	Peltula sp. TS41687
GCA_026026795.1	JAPETY000000000	SAMN27762798	Spribille s.n. 20.03.2020/TS-e1949	Phylliscum demangeonii
GCA_026026785.1	JAPETZ000000000	SAMN27762805	Spribille 37415/TS-e1976	Piccolia ochrophora
GCA_026027315.1	JAPEUA000000000	SAMN27762802	Spribille 41593/TS-e1965	Pleopsidium flavum
GCA_026026765.1	JAPEUB000000000	SAMN27762799	Spribille s.n. 21.07.2019/TS-e1952	Pycnora praestabilis
GCA_026026355.1	JAPEUC000000000	SAMN27762797	Spribille 41927/TS-e1948	Sarcosagium campestre
GCA_026026165.1	JAPEUD000000000	SAMN27762792	Spribille s.n. 20.10.2019/TS-e1941	Sarea resinae
GCA_026025825.1	JAPEUE000000000	SAMN27762782	Spribille 43138/TS-e1925	Sclerophora amabilis
GCA_026025805.1	JAPEUF000000000	SAMN27762804	Spribille s.n. 04.10.2020/TS-e1969	Thelocarpon impressellum
GCA_026025795.1	JAPEUG000000000	SAMN27762783	Spribille s.n. 20.10.2019/TS-e1926	Thelocarpon superellum
GCA_026026815.1	JAPEUH000000000	SAMN27762786	MO 302568/TS-e1930	Trichoglossum hirsutum
GCA_026024425.1	JAPETH000000000	SAMN27762801	Spribille s.n. 27.09.2020/TS-e1964	Trizodia sp. TS-e1964
GCA_026025075.1	JAPEUI000000000	SAMN27762796	Spribille s.n. 12.09.2020/TS-e1946	Vezdaea acicularis
GCA_026055935.1	JAPEUJ000000000	SAMN27762787	Spribille 44784/TS-e1932	Vezdaea aestivalis
GCA_026025055.1	JAPEUK000000000	SAMN27762778	Powell 4724/TS-e1886	Watsoniomyces obsoletus

SRA Data Details

Parameter	Value
Data volume, Gbases	702
Data volume, Tbytes	0.32

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lichen metagenome

Lichinomycetes genomes

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