Klebsiella (ID 861455) - BioProject

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Accession: PRJDB12116 ID: 861455

Klebsiella

Whole-genome sequencing of Klebsiella spp. isolated from Japan

Whole-genome sequencing of Klebsiella pneumoniae, K. variicola, K. quasipneumoniae, and K. michiganensis clinical isolates from Japan.

Accession	PRJDB12116
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Klebsiella[Taxonomy ID: 570] Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella
Publications	Nonogaki R et al., "PCR-based ORF typing of Klebsiella pneumoniae for rapid identification of global clones and transmission events.", J Appl Microbiol, 2022 Sep;133(3):2050-2062 Published online: Nonogaki R et al., "PCR -based ORF typing of Klebsiella pneumoniae for rapid identification of global clones and transmission events", Journal of Applied Microbiology, 2022;
Submission	Registration date: 22-Jul-2022 Nagoya University

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	12657
WGS master	154
SRA Experiments	154
Protein Sequences	800705
Publications
PubMed	1
Other datasets
BioSample	154
Assembly	154

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

8
146
154

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_026008475.1	BQUL00000000	SAMD00397362	NUBL-17187	Klebsiella michiganensis
GCA_026008455.1	BQUK00000000	SAMD00397361	NUBL-21980	Klebsiella michiganensis
GCA_026007515.1	BQSP00000000	SAMD00397314	MS6015	Klebsiella pneumoniae
GCA_026007495.1	BQSO00000000	SAMD00397313	MS5935	Klebsiella pneumoniae
GCA_026007475.1	BQSN00000000	SAMD00397312	MS5797	Klebsiella pneumoniae
GCA_026007455.1	BQSM00000000	SAMD00397311	MS5786	Klebsiella pneumoniae
GCA_026007435.1	BQSL00000000	SAMD00397310	MS5452	Klebsiella pneumoniae
GCA_026007415.1	BQSK00000000	SAMD00397309	MS5451	Klebsiella pneumoniae
GCA_026007395.1	BQSJ00000000	SAMD00397308	MS5380	Klebsiella pneumoniae
GCA_026007375.1	BQSI00000000	SAMD00397307	MS5232	Klebsiella pneumoniae
GCA_026007355.1	BQSH00000000	SAMD00397306	MS5214	Klebsiella pneumoniae
GCA_026007335.1	BQSG00000000	SAMD00397305	MS5202	Klebsiella pneumoniae
GCA_026007315.1	BQSF00000000	SAMD00397304	NUBL-22822	Klebsiella pneumoniae
GCA_026007295.1	BQSE00000000	SAMD00397303	NUBL-22820	Klebsiella pneumoniae
GCA_026007275.1	BQSD00000000	SAMD00397302	NUBL-22819	Klebsiella pneumoniae
GCA_026007255.1	BQSC00000000	SAMD00397301	NUBL-22817	Klebsiella pneumoniae
GCA_026007235.1	BQSB00000000	SAMD00397300	NUBL-13453	Klebsiella pneumoniae
GCA_026007215.1	BQSA00000000	SAMD00397299	NUBL-12144	Klebsiella pneumoniae
GCA_026007195.1	BQRZ00000000	SAMD00397298	NUBL-10709	Klebsiella pneumoniae
GCA_026007175.1	BQRY00000000	SAMD00397297	NUBL-10708	Klebsiella pneumoniae
GCA_026007155.1	BQRX00000000	SAMD00397296	NUBL-10701	Klebsiella pneumoniae
GCA_026007135.1	BQRW00000000	SAMD00397295	NUBL-10699	Klebsiella pneumoniae
GCA_026007115.1	BQRV00000000	SAMD00397294	NUBL-10698	Klebsiella pneumoniae
GCA_026007095.1	BQRU00000000	SAMD00397293	NUBL-9661	Klebsiella pneumoniae
GCA_026007075.1	BQRT00000000	SAMD00397292	NUBL-9656	Klebsiella pneumoniae
GCA_026007055.1	BQRS00000000	SAMD00397291	NUBL-8589	Klebsiella pneumoniae
GCA_026007035.1	BQRR00000000	SAMD00397290	NUBL-7079	Klebsiella pneumoniae
GCA_026007015.1	BQRQ00000000	SAMD00397289	NUBL-6723	Klebsiella pneumoniae
GCA_026006995.1	BQRP00000000	SAMD00397288	NUBL-2908	Klebsiella pneumoniae
GCA_026006975.1	BQRO00000000	SAMD00397287	NUBL-2899	Klebsiella pneumoniae
GCA_026006955.1	BQRN00000000	SAMD00397286	NUBL-2888	Klebsiella pneumoniae
GCA_026006935.1	BQRM00000000	SAMD00397285	NUBL-2886	Klebsiella pneumoniae
GCA_026006915.1	BQRL00000000	SAMD00397284	NUBL-8594	Klebsiella pneumoniae
GCA_026006895.1	BQRK00000000	SAMD00397283	NUBL-1866	Klebsiella pneumoniae
GCA_026006875.1	BQRJ00000000	SAMD00397282	NUBL-1858	Klebsiella pneumoniae
GCA_026006855.1	BQRI00000000	SAMD00397281	NUBL-515	Klebsiella pneumoniae
GCA_026006835.1	BQRH00000000	SAMD00397280	NUBL-19415	Klebsiella pneumoniae
GCA_026006815.1	BQRG00000000	SAMD00397279	NUBL-17198	Klebsiella pneumoniae
GCA_026006795.1	BQRF00000000	SAMD00397278	NUBL-17194	Klebsiella pneumoniae
GCA_026006775.1	BQRE00000000	SAMD00397277	NUBL-17193	Klebsiella pneumoniae
GCA_026006755.1	BQRD00000000	SAMD00397276	NUBL-17192	Klebsiella pneumoniae
GCA_026006735.1	BQRC00000000	SAMD00397275	NUBL-17191	Klebsiella pneumoniae
GCA_026006715.1	BQRB00000000	SAMD00397274	NUBL-17190	Klebsiella pneumoniae
GCA_026006695.1	BQRA00000000	SAMD00397273	NUBL-17189	Klebsiella pneumoniae
GCA_026006675.1	BQQZ00000000	SAMD00397272	NUBL-17188	Klebsiella pneumoniae
GCA_026006655.1	BQQY00000000	SAMD00397271	NUBL-17185	Klebsiella pneumoniae
GCA_026006635.1	BQQX00000000	SAMD00397270	NUBL-17184	Klebsiella pneumoniae
GCA_026006615.1	BQQW00000000	SAMD00397269	NUBL-17183	Klebsiella pneumoniae
GCA_026006595.1	BQQV00000000	SAMD00397268	NUBL-17182	Klebsiella pneumoniae
GCA_026006575.1	BQQU00000000	SAMD00397267	NUBL-13939	Klebsiella pneumoniae
GCA_026006555.1	BQQT00000000	SAMD00397266	NUBL-13938	Klebsiella pneumoniae
GCA_026006535.1	BQQS00000000	SAMD00397265	NUBL-13937	Klebsiella pneumoniae
GCA_026006515.1	BQQR00000000	SAMD00397264	NUBL-13936	Klebsiella pneumoniae
GCA_026006495.1	BQQQ00000000	SAMD00397263	NUBL-13800	Klebsiella pneumoniae
GCA_026006475.1	BQQP00000000	SAMD00397262	NUBL-13799	Klebsiella pneumoniae
GCA_026006455.1	BQQO00000000	SAMD00397261	NUBL-13798	Klebsiella pneumoniae
GCA_026006435.1	BQQN00000000	SAMD00397260	NUBL-13797	Klebsiella pneumoniae
GCA_026006415.1	BQQM00000000	SAMD00397259	NUBL-13796	Klebsiella pneumoniae
GCA_026006395.1	BQQL00000000	SAMD00397258	NUBL-13795	Klebsiella pneumoniae
GCA_026006375.1	BQQK00000000	SAMD00397257	NUBL-13794	Klebsiella pneumoniae
GCA_026006355.1	BQQJ00000000	SAMD00397256	NUBL-13793	Klebsiella pneumoniae
GCA_026006335.1	BQQI00000000	SAMD00397255	NUBL-13792	Klebsiella pneumoniae
GCA_026006315.1	BQQH00000000	SAMD00397254	NUBL-13791	Klebsiella pneumoniae
GCA_026006295.1	BQQG00000000	SAMD00397253	NUBL-13790	Klebsiella pneumoniae
GCA_026006275.1	BQQF00000000	SAMD00397252	NUBL-13789	Klebsiella pneumoniae
GCA_026006255.1	BQQE00000000	SAMD00397251	NUBL-13788	Klebsiella pneumoniae
GCA_026006235.1	BQQD00000000	SAMD00397250	NUBL-13787	Klebsiella pneumoniae
GCA_026006215.1	BQQC00000000	SAMD00397249	NUBL-13786	Klebsiella pneumoniae
GCA_026006195.1	BQQB00000000	SAMD00397248	NUBL-13785	Klebsiella pneumoniae
GCA_026006175.1	BQQA00000000	SAMD00397247	NUBL-13784	Klebsiella pneumoniae
GCA_026006155.1	BQPZ00000000	SAMD00397246	NUBL-13783	Klebsiella pneumoniae
GCA_026006135.1	BQPY00000000	SAMD00397245	NUBL-13782	Klebsiella pneumoniae
GCA_026006115.1	BQPX00000000	SAMD00397244	NUBL-13781	Klebsiella pneumoniae
GCA_026006095.1	BQPW00000000	SAMD00397243	NUBL-13780	Klebsiella pneumoniae
GCA_026006075.1	BQPV00000000	SAMD00397242	NUBL-13779	Klebsiella pneumoniae
GCA_026006055.1	BQPU00000000	SAMD00397241	NUBL-23634	Klebsiella pneumoniae
GCA_026006035.1	BQPT00000000	SAMD00397240	NUBL-22010	Klebsiella pneumoniae
GCA_026006015.1	BQPS00000000	SAMD00397239	NUBL-22009	Klebsiella pneumoniae
GCA_026005995.1	BQPR00000000	SAMD00397238	NUBL-22008	Klebsiella pneumoniae
GCA_026005975.1	BQPQ00000000	SAMD00397237	NUBL-22007	Klebsiella pneumoniae
GCA_026005955.1	BQPP00000000	SAMD00397236	NUBL-22006	Klebsiella pneumoniae
GCA_026005935.1	BQPO00000000	SAMD00397235	NUBL-22004	Klebsiella pneumoniae
GCA_026005915.1	BQPN00000000	SAMD00397234	NUBL-22003	Klebsiella pneumoniae
GCA_026005895.1	BQPM00000000	SAMD00397233	NUBL-22001	Klebsiella pneumoniae
GCA_026005875.1	BQPL00000000	SAMD00397232	NUBL-22000	Klebsiella pneumoniae
GCA_026005855.1	BQPK00000000	SAMD00397231	NUBL-21999	Klebsiella pneumoniae
GCA_026005835.1	BQPJ00000000	SAMD00397230	NUBL-21998	Klebsiella pneumoniae
GCA_026005815.1	BQPI00000000	SAMD00397229	NUBL-21997	Klebsiella pneumoniae
GCA_026005795.1	BQPH00000000	SAMD00397228	NUBL-21996	Klebsiella pneumoniae
GCA_026005775.1	BQPG00000000	SAMD00397227	NUBL-21995	Klebsiella pneumoniae
GCA_026005755.1	BQPF00000000	SAMD00397226	NUBL-21994	Klebsiella pneumoniae
GCA_026005735.1	BQPE00000000	SAMD00397225	NUBL-21993	Klebsiella pneumoniae
GCA_026005715.1	BQPD00000000	SAMD00397224	NUBL-21992	Klebsiella pneumoniae
GCA_026005695.1	BQPC00000000	SAMD00397223	NUBL-21991	Klebsiella pneumoniae
GCA_026005675.1	BQPB00000000	SAMD00397222	NUBL-21990	Klebsiella pneumoniae
GCA_026005655.1	BQPA00000000	SAMD00397221	NUBL-21989	Klebsiella pneumoniae
GCA_026005635.1	BQOZ00000000	SAMD00397220	NUBL-21988	Klebsiella pneumoniae
GCA_026005615.1	BQOY00000000	SAMD00397219	NUBL-21987	Klebsiella pneumoniae
GCA_026005595.1	BQOX00000000	SAMD00397218	NUBL-21986	Klebsiella pneumoniae
GCA_026005575.1	BQOW00000000	SAMD00397217	NUBL-21985	Klebsiella pneumoniae
GCA_026005555.1	BQOV00000000	SAMD00397216	NUBL-21984	Klebsiella pneumoniae
GCA_026005535.1	BQOU00000000	SAMD00397215	NUBL-21982	Klebsiella pneumoniae
GCA_026005515.1	BQOT00000000	SAMD00397214	NUBL-21981	Klebsiella pneumoniae
GCA_026005495.1	BQOS00000000	SAMD00397213	NUBL-21979	Klebsiella pneumoniae
GCA_026005475.1	BQOR00000000	SAMD00397212	NUBL-21978	Klebsiella pneumoniae
GCA_026005455.1	BQOQ00000000	SAMD00397211	NUBL-21976	Klebsiella pneumoniae
GCA_026005435.1	BQOP00000000	SAMD00397210	NUBL-21975	Klebsiella pneumoniae
GCA_026005415.1	BQOO00000000	SAMD00397209	NUBL-21973	Klebsiella pneumoniae
GCA_026008435.1	BQUJ00000000	SAMD00397360	NUKP-108	Klebsiella quasipneumoniae
GCA_026008415.1	BQUI00000000	SAMD00397359	NUKP-79	Klebsiella quasipneumoniae
GCA_026008395.1	BQUH00000000	SAMD00397358	NUKP-77-1	Klebsiella quasipneumoniae
GCA_026008375.1	BQUG00000000	SAMD00397357	NUKP-74	Klebsiella quasipneumoniae
GCA_026008355.1	BQUF00000000	SAMD00397356	NUKP-71	Klebsiella quasipneumoniae
GCA_026008335.1	BQUE00000000	SAMD00397355	NUKP-48	Klebsiella quasipneumoniae
GCA_026008315.1	BQUD00000000	SAMD00397354	NUKP-47	Klebsiella quasipneumoniae
GCA_026008295.1	BQUC00000000	SAMD00397353	NUKP-43	Klebsiella quasipneumoniae
GCA_026008275.1	BQUB00000000	SAMD00397352	NUKP-28	Klebsiella quasipneumoniae
GCA_026008255.1	BQUA00000000	SAMD00397351	NUKP-16	Klebsiella quasipneumoniae
GCA_026008235.1	BQTZ00000000	SAMD00397350	NUKP-2	Klebsiella quasipneumoniae
GCA_026008215.1	BQTY00000000	SAMD00397349	NUBL-17186	Klebsiella quasipneumoniae
GCA_026008195.1	BQTX00000000	SAMD00397348	NUBL-21977	Klebsiella quasipneumoniae
GCA_026008175.1	BQTW00000000	SAMD00397347	NUBL-21974	Klebsiella quasipneumoniae
GCA_026008155.1	BQTV00000000	SAMD00397346	NUKP-104	Klebsiella variicola
GCA_026008135.1	BQTU00000000	SAMD00397345	NUKP-99	Klebsiella variicola
GCA_026008115.1	BQTT00000000	SAMD00397344	NUKP-88	Klebsiella variicola
GCA_026008095.1	BQTS00000000	SAMD00397343	NUKP-86	Klebsiella variicola
GCA_026008075.1	BQTR00000000	SAMD00397342	NUKP-84	Klebsiella variicola
GCA_026008055.1	BQTQ00000000	SAMD00397341	NUKP-82	Klebsiella variicola
GCA_026008035.1	BQTP00000000	SAMD00397340	NUKP-76	Klebsiella variicola
GCA_026008015.1	BQTO00000000	SAMD00397339	NUKP-68	Klebsiella variicola
GCA_026007995.1	BQTN00000000	SAMD00397338	NUKP-67	Klebsiella variicola
GCA_026007975.1	BQTM00000000	SAMD00397337	NUKP-66	Klebsiella variicola
GCA_026007955.1	BQTL00000000	SAMD00397336	NUKP-65	Klebsiella variicola
GCA_026007935.1	BQTK00000000	SAMD00397335	NUKP-64	Klebsiella variicola
GCA_026007915.1	BQTJ00000000	SAMD00397334	NUKP-62	Klebsiella variicola
GCA_026007895.1	BQTI00000000	SAMD00397333	NUKP-61	Klebsiella variicola
GCA_026007875.1	BQTH00000000	SAMD00397332	NUKP-55	Klebsiella variicola
GCA_026007855.1	BQTG00000000	SAMD00397331	NUKP-49	Klebsiella variicola
GCA_026007835.1	BQTF00000000	SAMD00397330	NUKP-42	Klebsiella variicola
GCA_026007815.1	BQTE00000000	SAMD00397329	NUKP-41	Klebsiella variicola
GCA_026007795.1	BQTD00000000	SAMD00397328	NUKP-40	Klebsiella variicola
GCA_026007775.1	BQTC00000000	SAMD00397327	NUKP-39	Klebsiella variicola
GCA_026007755.1	BQTB00000000	SAMD00397326	NUKP-38	Klebsiella variicola
GCA_026007735.1	BQTA00000000	SAMD00397325	NUKP-37	Klebsiella variicola
GCA_026007715.1	BQSZ00000000	SAMD00397324	NUKP-33	Klebsiella variicola
GCA_026007695.1	BQSY00000000	SAMD00397323	NUKP-32	Klebsiella variicola
GCA_026007675.1	BQSX00000000	SAMD00397322	NUKP-24	Klebsiella variicola
GCA_026007655.1	BQSW00000000	SAMD00397321	NUKP-23	Klebsiella variicola
GCA_026007635.1	BQSV00000000	SAMD00397320	NUKP-18	Klebsiella variicola
GCA_026007615.1	BQSU00000000	SAMD00397319	NUKP-6	Klebsiella variicola
GCA_026007595.1	BQST00000000	SAMD00397318	NUBL-22018	Klebsiella variicola
GCA_026007575.1	BQSS00000000	SAMD00397317	NUBL-22002	Klebsiella variicola
GCA_026007555.1	BQSR00000000	SAMD00397316	NUBL-21983	Klebsiella variicola
GCA_026007535.1	BQSQ00000000	SAMD00397315	MS6016	Klebsiella variicola

SRA Data Details

Parameter	Value
Data volume, Gbases	44
Data volume, Mbytes	27398

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Klebsiella

Whole-genome sequencing of Klebsiella spp. isolated from Japan

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