Salmonella enterica subsp. enterica (ID 803326) - BioProject

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Accession: PRJNA803326 ID: 803326

Salmonella enterica subsp. enterica

Genome sequencing and assembly of Salmonella enterica subsp. enterica isolates

See Genome Information for Salmonella enterica

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Genomic analyses of Salmonella enterica serovar Kentucky from human clinical samples in Switzerland

Accession	PRJNA803326
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Salmonella enterica subsp. enterica[Taxonomy ID: 59201] Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica
Publications	Published online: Biggel M et al., "Epidemiological links and antimicrobial resistance of clinical Salmonella enterica ST198 isolates: a nationwide microbial population genomic study in Switzerland", Microbial Genomics, 2022;8(10)
Submission	Registration date: 12-Apr-2022 University of Zurich
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	85
WGS master	68
Genomic DNA	17
SRA Experiments	82
Protein Sequences	31630
Other datasets
BioSample	75
Assembly	75

Assembly details:

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Assembly level

Number of Assemblies

Complete genome

Contig

Total

7
68
75

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_022936425.1		3	SAMN25644148	N12-0931	Salmonella enterica subsp. enterica serovar Kentucky
GCA_022936405.1		3	SAMN25644152	N12-1542	Salmonella enterica subsp. enterica serovar Kentucky
GCA_022936385.1		2	SAMN25644136	N14-1660	Salmonella enterica subsp. enterica serovar Kentucky
GCA_022936365.1		5	SAMN25644119	N16-1393	Salmonella enterica subsp. enterica serovar Kentucky
GCA_022936345.1		1	SAMN25644122	N18-2092	Salmonella enterica subsp. enterica serovar Kentucky
GCA_022936485.1		2	SAMN25644135	N12-0259	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023008145.1	JAKOEJ000000000		SAMN25644097	N18-0332	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023008125.1	JAKOEI000000000		SAMN25644098	N14-2109	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023008105.1	JAKOEH000000000		SAMN25644099	N16-0284	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023008075.1	JAKOEG000000000		SAMN25644100	N12-1984	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023008065.1	JAKOEF000000000		SAMN25644101	N18-1721	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023008045.1	JAKOEE000000000		SAMN25644102	N12-1698	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023008025.1	JAKOEC000000000		SAMN25644104	N12-2173	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023008005.1	JAKOED000000000		SAMN25644103	N10-0638	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007945.1	JAKODZ000000000		SAMN25644107	N14-0987	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007985.1	JAKOEA000000000		SAMN25644106	N14-1167	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007955.1	JAKOEB000000000		SAMN25644105	N10-1038	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007925.1	JAKODY000000000		SAMN25644108	N14-0964	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007905.1	JAKODX000000000		SAMN25644109	N18-1031	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007885.1	JAKODW000000000		SAMN25644110	N16-0997	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007855.1	JAKODU000000000		SAMN25644112	N16-1862	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007845.1	JAKODV000000000		SAMN25644111	N18-0866	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007825.1	JAKODT000000000		SAMN25644113	N18-0008	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007805.1	JAKODS000000000		SAMN25644114	N18-1713	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007785.1	JAKODR000000000		SAMN25644115	N20-0541	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007755.1	JAKODO000000000		SAMN25644118	N18-2540	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007745.1	JAKODP000000000		SAMN25644117	N18-2752	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007725.1	JAKODQ000000000		SAMN25644116	N12-1286	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007705.1	JAKODN000000000		SAMN25644120	N16-1609	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007665.1	JAKODM000000000		SAMN25644123	N14-1311	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007655.1	JAKODK000000000		SAMN25644125	N16-1119	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007645.1	JAKODL000000000		SAMN25644124	N14-1006	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007625.1	JAKODI000000000		SAMN25644127	N16-1061	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007605.1	JAKODJ000000000		SAMN25644126	N12-2104	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007585.1	JAKODG000000000		SAMN25644129	N18-1109	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007565.1	JAKODH000000000		SAMN25644128	N16-0631	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007545.1	JAKODD000000000		SAMN25644132	N12-0188	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007525.1	JAKODF000000000		SAMN25644130	N18-0150	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007505.1	JAKODE000000000		SAMN25644131	N18-1392	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007455.1	JAKODB000000000		SAMN25644134	N20-0343	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007465.1	JAKODC000000000		SAMN25644133	N14-2250	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007445.1	JAKOCZ000000000		SAMN25644138	N12-2458	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007425.1	JAKODA000000000		SAMN25644137	N12-0867	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007405.1	JAKOCY000000000		SAMN25644139	N12-0107	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007365.1	JAKOCU000000000		SAMN25644143	N18-2751	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007375.1	JAKOCW000000000		SAMN25644141	N20-1508	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007335.1	JAKOCV000000000		SAMN25644142	N18-0234	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007325.1	JAKOCX000000000		SAMN25644140	N16-1650	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007305.1	JAKOCT000000000		SAMN25644144	N18-2511	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007275.1	JAKOCR000000000		SAMN25644146	N14-0780	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007265.1	JAKOCQ000000000		SAMN25644147	N12-0332	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007225.1	JAKOCP000000000		SAMN25644149	N10-2329	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007235.1	JAKOCS000000000		SAMN25644145	N20-0266	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007205.1	JAKOCO000000000		SAMN25644150	N10-2298	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007185.1	JAKOCN000000000		SAMN25644151	N16-1660	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007145.1	JAKOCM000000000		SAMN25644153	N12-0212	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007155.1	JAKOCL000000000		SAMN25644154	N16-0025	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007125.1	JAKOCJ000000000		SAMN25644156	N10-0422	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007105.1	JAKOCK000000000		SAMN25644155	N12-2073	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007085.1	JAKOCH000000000		SAMN25644158	N10-1972	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007065.1	JAKOCI000000000		SAMN25644157	N14-2176	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007035.1	JAKOCF000000000		SAMN25644160	N16-1047	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007025.1	JAKOCE000000000		SAMN25644161	N16-2924	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023007005.1	JAKOCG000000000		SAMN25644159	N16-2721	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023006985.1	JAKOCD000000000		SAMN25644162	N16-0820	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023006965.1	JAKOCC000000000		SAMN25644163	N16-0789	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023006945.1	JAKOCB000000000		SAMN25644164	N14-2306	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023006915.1	JAKOBW000000000		SAMN25644169	N16-0644	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023006905.1	JAKOBZ000000000		SAMN25644166	N18-2845	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023006885.1	JAKOCA000000000		SAMN25644165	N14-0385	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023006865.1	JAKOBY000000000		SAMN25644167	N16-0860	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023006825.1	JAKOBV000000000		SAMN25644170	N14-0851	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023006835.1	JAKOBX000000000		SAMN25644168	N14-2368	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023006805.1	JAKOBU000000000		SAMN25644171	N14-0123	Salmonella enterica subsp. enterica serovar Kentucky
GCA_023159325.1		1	SAMN25644121	N20-2289	Salmonella enterica subsp. enterica serovar Kentucky

SRA Data Details

Parameter	Value
Data volume, Gbases	26
Data volume, Mbytes	11209

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Salmonella enterica subsp. enterica

Genome sequencing and assembly of Salmonella enterica subsp. enterica isolates

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