Escherichia coli S88 (ID 33375) - BioProject

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Accession: PRJNA33375 ID: 33375

Escherichia coli S88

Meningitis isolate

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Escherichia coli S88. Escherichia coli S88 is a serotype O45:K1 strain isolated from a case of neonatal meningitis and will be used for comparative analysis.

Accession	PRJNA33375
Data Type	Genome sequencing
Scope	Monoisolate
Organism	Escherichia coli S88[Taxonomy ID: 585035] Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; Escherichia coli S88
Publications	Peigne C et al., "The plasmid of Escherichia coli strain S88 (O45:K1:H7) that causes neonatal meningitis is closely related to avian pathogenic E. coli plasmids and is associated with high-level bacteremia in a neonatal rat meningitis model.", Infect Immun, 2009 Jun;77(6):2272-84
Submission	Registration date: 19-Dec-2008 Genoscope
Locus Tag Prefix	ECS88

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (Genomic DNA)	2
Protein Sequences	4832
Publications
PubMed	1
PMC	1
Other datasets
BioSample	1
Assembly	1

Assembly details:

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Assembly	Level	Chrs	BioSample	Taxonomy
GCA_000026285.2	Complete genome	2	SAMEA3138231	Escherichia coli S88

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LinkOut to external resources

GOLD: Gp0001406 [Genomes On Line Database]
GOLD: Gp0001406
Genomes On Line Database
644736364: Escherichia coli O45:K1 S88 [Integrated Microbial Genomes]
644736364: Escherichia coli O45:K1 S88
Integrated Microbial Genomes
SILVA LSU Database [SILVA]
SILVA LSU Database
SILVA
SILVA SSU Database [SILVA]
SILVA SSU Database
SILVA

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Escherichia coli S88
Escherichia coli S88
Meningitis isolate

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Top3b topoisomerase (DNA) III beta [Mus musculus]
Top3b topoisomerase (DNA) III beta [Mus musculus]
Gene ID:21976

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Mus musculus mRNA for ERK2, complete cds
Mus musculus mRNA for ERK2, complete cds
gi|220994|dbj|D10939.1|MUSERK2

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