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Accession: PRJNA605861 ID: 605861

Genome sequencing of Antarctic bacteria

The Antarctic bacteria is an untapped environment proposed as a promising source of new drugs. More...

Accession	PRJNA605861
Data Type	Genome sequencing
Scope	Multispecies
Publications	Núñez-Montero K et al., "Antarctic Rahnella inusitata: A Producer of Cold-Stable β-Galactosidase Enzymes.", Int J Mol Sci, 2021 Apr 16;22(8) Núñez-Montero K et al., "Genomic and Metabolomic Analysis of Antarctic Bacteria Revealed Culture and Elicitation Conditions for the Production of Antimicrobial Compounds.", Biomolecules, 2020 Apr 27;10(5)
Submission	Registration date: 10-Feb-2020 Network for Extreme Environment Research - Universidad de La Frontera
Relevance	Evolution

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	15
WGS master	2
Genomic DNA	13
SRA Experiments	6
Protein Sequences	42533
Publications
PubMed	2
PMC	2
Other datasets
BioSample	13
Assembly	13

Assembly details:

Assembly level

Number of Assemblies

Complete genome

Complete genome

Chromosome

Contig

10
1
2
13

Assembly	Level	WGS	Chrs	BioSample	Infraspecies Id	Taxonomy
GCA_036867135.1		JBAJIJ000000000		SAMN39921784	Sec7.5	Aeromicrobium sp. Sec7.5
GCA_036867195.1		JBAJII000000000		SAMN39921785	Soc17.1.1.1	Arthrobacter sp. Soc17.1.1.1
GCA_014171535.1			1	SAMN14081047	So1b	Bacillus subtilis
GCA_019464495.1			1	SAMN20463154	Wa41.01b-2	Leucobacter luti
GCA_014171775.1			1	SAMN14081049	Dwa41.01b	Massilia sp. Dwa41.01b
GCA_014171595.1			1	SAMN14081052	Se16.2.3	Massilia sp. Se16.2.3
GCA_019464375.1			1	SAMN20463155	Se5.02b	Microbacterium sp. Se5.02b
GCA_014171575.1			1	SAMN14081050	Se63.02b	Microbacterium sp. Se63.02b
GCA_019464455.1			1	SAMN20463153	Wa41.01b-1	Pseudochrobactrum sp. Wa41.01b-1
GCA_019464415.1			1	SAMN20463152	So3.2b	Pseudomonas sp. So3.2b
GCA_018288855.1			3	SAMN16814261	Se8.10.12	Rahnella inusitata
GCA_014171475.1			1	SAMN14081048	So64.6b	Sphingomonas sp. So64.6b
GCA_014171555.1			1	SAMN14081051	SoD9b	Stenotrophomonas maltophilia

SRA Data Details

Parameter	Value
Data volume, Gbases	10
Data volume, Mbytes	4592

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gi|1489964846|gnl|uoguelph|SMTPP527 OI-5P|gb|MG342965.1|

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