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Accession: PRJNA717305 ID: 717305

Homalodisca vitripennis isolate:Tulare (glassy-winged sharpshooter)

Homalodisca vitripennis Tulare and endosymbionts Genome sequencing and assembly

Genome sequencing and annotation of Glassy-winged Sharpshooter collected from Tulare county representing 3 individual insects.

Accession	PRJNA717305
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Homalodisca vitripennis[Taxonomy ID: 197043] Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Auchenorrhyncha; Membracoidea; Cicadellidae; Cicadellinae; Proconiini; Homalodisca; Homalodisca vitripennis
Publications (total 4) Less...	Ettinger CL et al., "Transcriptome and population structure of glassy-winged sharpshooters (Homalodisca vitripennis) with varying insecticide resistance in southern California.", BMC Genomics, 2022 Oct 22;23(1):721 More... Ettinger CL et al., "Transcriptome and population structure of glassy-winged sharpshooters (Homalodisca vitripennis) with varying insecticide resistance in southern California.", BMC Genomics, 2022 Oct 22;23(1):721 Ettinger CL et al., "Metagenome-Assembled Genomes of Bacterial Symbionts Associated with Insecticide-Resistant and -Susceptible Individuals of the Glassy-Winged Sharpshooter (Homalodisca vitripennis).", Microbiol Resour Announc, 2022 Jul 21;11(7):e0050622 Ettinger CL et al., "Improved draft reference genome for the Glassy-winged Sharpshooter (Homalodisca vitripennis), a vector for Pierce's disease.", G3 (Bethesda), 2021 Sep 27;11(10) Byrne FJ et al., "Insecticide resistance in California populations of the glassy-winged sharpshooter Homalodisca vitripennis.", Pest Manag Sci, 2021 May;77(5):2315-2323 Less...
Grants	"GENOMIC TOOLS TO MONITOR AND EXPLOIT MICROBIAL DIVERSITY FOR AGRICULTURAL DISEASE AND ARIDLAND MANAGEMENT" (Grant ID CA-R-PPA-5062-H, United States Dept of Agriculture)
Submission	Registration date: 27-Jul-2021 University of California, Riverside
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	12062
WGS master	4
SRA Experiments	4
Protein Sequences	98284
Publications
PubMed	4
PMC	3
Other datasets
BioSample	4
Assembly	4

Assembly details:

Assembly level

Number of Assemblies

Scaffold

4
4

Assembly	Level	WGS	BioSample	Isolate	Taxonomy
GCA_022867485.1		JALIDI000000000	SAMN27114269	SUS-01	Candidatus Karelsulcia muelleri
GCA_022865205.1		JALIDJ000000000	SAMN27114270	SUS-02	Candidatus Palibaumannia cicadellinicola
GCA_019364655.1		JAGXCG000000000	SAMN18497788	Tulare	Homalodisca vitripennis
GCA_022867525.1		JALIDK000000000	SAMN27114271	SUS-03	Wolbachia endosymbiont of Homalodisca vitripennis

SRA Data Details

Parameter	Value
Data volume, Gbases	134
Data volume, Mbytes	65562

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BioProject Links for Protein (Select 2073234628) (1)
BioProject
Homalodisca vitripennis isolate:Tulare
Homalodisca vitripennis isolate:Tulare
Homalodisca vitripennis Tulare and endosymbionts Genome sequencing and assembly

BioProject
PubChem Substance Links for Gene (Select 547220) (5)
PubChem Substance
Concise Conserved Domain Links for Protein (Select 2073234628) (2)
Conserved Domains
Taxonomy Links for Nucleotide (Select 228860904) (1)
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