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Links from Protein

Accession: PRJNA706707 ID: 706707

Ogataea

Ogataea polymorpha species complex population genomics

Ogataea polymorpha species complex population genomics
AccessionPRJNA706707
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismOgataea[Taxonomy ID: 461281]
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Pichiales; Pichiaceae; Ogataea
Grants
  • "Killer plasmids as drivers of genetic code changes during yeast evolution" (Grant ID 789341, European Research Council)
SubmissionRegistration date: 13-Jul-2021
Colorado College
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)1858
WGS master47
SRA Experiments48
Protein Sequences249404
Other datasets
BioSample47
Assembly47
Assembly details:
Assembly levelNumber of Assemblies
40
7
47
AssemblyLevelWGSChrsBioSampleIsolateTaxonomy
GCA_019207605.1ScaffoldJAHLVD000000000
SAMN18128837
51-138
GCA_019207635.1ScaffoldJAHLVE000000000
SAMN18128836
50-97
GCA_019207615.1ScaffoldJAHLVC000000000
SAMN18128838
51-177
GCA_019207585.1ScaffoldJAHLVF000000000
SAMN18128835
50-165
GCA_019207555.1ContigJAHLUY000000000
SAMN18128842
61-235
GCA_019207525.1ScaffoldJAHLVB000000000
SAMN18128839
52-251
GCA_019207505.1ScaffoldJAHLUZ000000000
SAMN18128841
61-224
GCA_019207515.1ScaffoldJAHLVA000000000
SAMN18128840
60-394
GCA_019207475.1ContigJAHLUX000000000
SAMN18128843
61-244
GCA_019207455.1ScaffoldJAHLUW000000000
SAMN18128844
CBS 2575
GCA_019207435.1ContigJAHLUT000000000
SAMN18128846
79-204-41
GCA_019207415.1ScaffoldJAHLUU000000000
SAMN18128845
78-557-3
GCA_019207405.1ScaffoldJAHLUS000000000
SAMN18128847
81-408-1
GCA_019207375.1ScaffoldJAHLUR000000000
SAMN18128848
81-410
GCA_019207365.1ScaffoldJAHLUQ000000000
SAMN18128849
81-419-3
GCA_019207315.1ScaffoldJAHLUO000000000
SAMN18128851
81-433-4
GCA_019207325.1ScaffoldJAHLUP000000000
SAMN18128850
81-419-5
GCA_019207295.1ScaffoldJAHLUM000000000
SAMN18128853
81-440-2
GCA_019207285.1ScaffoldJAHLUL000000000
SAMN18128854
81-453-3
GCA_019207265.1ScaffoldJAHLUN000000000
SAMN18128852
81-436-3
GCA_019207235.1ScaffoldJAHLUK000000000
SAMN18128855
81-461-3
GCA_019207205.1ScaffoldJAHLUJ000000000
SAMN18128856
81-463-1
GCA_019207185.1ScaffoldJAHLUG000000000
SAMN18128860
83-425-4
GCA_019207175.1ContigJAHLUI000000000
SAMN18128858
81-480
GCA_019207165.1ScaffoldJAHLUV000000000
SAMN18128857
81-471-3
GCA_019207125.1ScaffoldJAHLUD000000000
SAMN18128863
83-442-1
GCA_019207005.1ContigJAHLUH000000000
SAMN18128859
83-405-1
GCA_019206985.1ScaffoldJAHLUC000000000
SAMN18128864
83-471-3
GCA_019206965.1ContigJAHLUF000000000
SAMN18128861
83-437-2-1
GCA_019206925.1ContigJAHLUE000000000
SAMN18128862
83-437-2-2
GCA_019206915.1ScaffoldJAHLUA000000000
SAMN18128866
83-476-5
GCA_019206905.1ScaffoldJAHLUB000000000
SAMN18128865
83-474-2
GCA_019207935.1ScaffoldJAHLVI000000000
SAMN18128831
CBS 12304
GCA_019207695.1ScaffoldJAHLVH000000000
SAMN18128832
73-26
GCA_019207595.1ScaffoldJAHLVG000000000
SAMN18128834
CBS 11895
GCA_019208045.1ScaffoldJAHLVS000000000
SAMN18128821
CBS 1976
GCA_019208005.1ScaffoldJAHLVR000000000
SAMN18128822
72-225
GCA_019207995.1ScaffoldJAHLVT000000000
SAMN18128820
CBS 4732
GCA_019207965.1ScaffoldJAHLVM000000000
SAMN18128827
YB-179
GCA_019207905.1ScaffoldJAHLVQ000000000
SAMN18128823
Y-2423
GCA_019207825.1ScaffoldJAHLVP000000000
SAMN18128824
Y-27293
GCA_019207835.1ScaffoldJAHLVN000000000
SAMN18128826
Y-6005
GCA_019207815.1ScaffoldJAHLVO000000000
SAMN18128825
Y-27863
GCA_019207735.1ScaffoldJAHLVJ000000000
SAMN18128830
CBS 7239
GCA_019207725.1ScaffoldJAHLVK000000000
SAMN18128829
CBS 7031
GCA_019207715.1ScaffoldJAHLVL000000000
SAMN18128828
CBS 5032
GCA_019381815.1ScaffoldJAHKSL000000000SAMN18128833
CBS 1977
SRA Data Details
ParameterValue
Data volume, Gbases91
Data volume, Mbytes36166
Related Project Category: RefseqGenbank
PRJNA756329 : Ogataea RefSeq Genome sequencing and assembly

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