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Links from Protein

Accession: PRJNA639797 ID: 639797

Pseudomonas sp.

Multiple environmental isolates belonging to the Pseudomonas genus. Genome sequencing and assembly

This project includes genomics data from multiple new Pseudomonas species that are undergoing characterization.
AccessionPRJNA639797
Data TypeGenome sequencing and assembly
ScopeMultispecies
Publications (total 4)
  • Cesa-Luna C et al., "Charting the Lipopeptidome of Nonpathogenic Pseudomonas.", mSystems, 2023 Feb 23;8(1):e0098822
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SubmissionRegistration date: 16-Jun-2020
KU Leuven
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)73
WGS master48
Genomic DNA25
SRA Experiments89
Protein Sequences128196
Publications
PubMed3
PMC3
Other datasets
BioSample73
Assembly72
Assembly details:
Assembly levelNumber of Assemblies
24
1
47
72
AssemblyLevelWGSChrsBioSampleStrainTaxonomy
GCA_019141525.1Complete genomeSAMN19473664
SWRI17
GCA_014269225.2Complete genomeSAMN15248309
RD8MR3
GCA_019139815.1Complete genomeSAMN19473665
SWRI132
GCA_019139875.1Complete genomeSAMN19473659
SWRI76
GCA_019145355.1ContigJAHSTY000000000
SAMN19580037
SWRI103
GCA_019145495.1ContigJAHSTU000000000
SAMN19473663
SWRI74
GCA_019139795.1Complete genomeSAMN19473666
SWRI123
GCA_019145475.1ContigJAHTKI000000000
SAMN19473668
COW3
GCA_019145435.1ContigJAHSTS000000000
SAMN19473669
COR58
GCA_019139895.1Complete genomeSAMN19473671
COW40
GCA_019145235.1ContigJAHSTV000000000
SAMN19473662
SWRI79
GCA_014268805.2ContigJABWRF000000000
SAMN15248330
SWRI107
GCA_014268595.2Complete genomeSAMN15248342
SWRI65
GCA_014268585.2Complete genomeSAMN15248341
SWRI54
GCA_014269205.2ContigJABWRY000000000
SAMN15248311
SWRI100
GCA_019145205.1ContigJAHSTT000000000
SAMN19473667
SWRI124
GCA_014268505.2ContigJABWQP000000000
SAMN15248346
SWRI153
GCA_014269245.2ContigJABWSB000000000
SAMN15248308
RW1P2
GCA_014268265.1ContigJABWQE000000000
SAMN15248359
PGSB 8273
GCA_014268235.1ContigJABWQD000000000
SAMN15248360
PGSB 7828
GCA_014268225.1ContigJABWQC000000000
SAMN15248361
PGSB 3962
GCA_014268655.2ContigJABWQX000000000
SAMN15248338
SWRI102
GCA_019139675.1Complete genomeSAMN19473670
COW77
GCA_014268495.2Complete genomeSAMN15248347
PGSB 8459
GCA_014268925.1ContigJABWRK000000000
SAMN15248325
BW18S1
GCA_014268895.1ContigJABWRL000000000
SAMN15248324
RW5S2
GCA_019139535.1Complete genomeSAMN19473673
COW39
GCA_014268695.2Complete genomeSAMN15248336
SWRI108
GCA_014269185.2ContigJABWRZ000000000
SAMN15248310
RD9SR1
GCA_014268365.1ContigJABWQI000000000
SAMN15248354
SWRI70
GCA_014268935.2ContigJABWRJ000000000
SAMN15248326
BW13M1
GCA_014268305.1ContigJABWQH000000000
SAMN15248355
SWRI2
GCA_014269025.2Complete genomeSAMN15248319
RW10S1
GCA_014268405.1ContigJABWQL000000000
SAMN15248351
SWRI104
GCA_014268375.2Complete genomeSAMN15248353
SWRI126
GCA_019139855.1Complete genomeSAMN19580036
CMR12a
GCA_014268455.2Complete genomeSAMN15248350
SWRI52
GCA_014268785.2ContigJABWRD000000000
SAMN15248332
SWRI56
GCA_019145195.1ContigJAHSTW000000000
SAMN19473661
SWRI31
GCA_014268865.1ContigJABWRI000000000
SAMN15248327
BW16M2
GCA_014268205.2Complete genomeSAMN15248362
OE 28.3
GCA_014268985.1ContigJABWRO000000000
SAMN15248321
RW10S2
GCA_014268955.1ContigJABWRM000000000
SAMN15248323
RW3S2
GCA_014268555.1ContigJABWQQ000000000
SAMN15248345
SWRI111
GCA_014268285.2ContigJABWQG000000000
SAMN15248357
SWRI144
GCA_014268645.1ContigJABWQW000000000
SAMN15248339
SWRI154
GCA_014268705.1ContigJABWRA000000000
SAMN15248335
SWRI179
GCA_014268345.1ContigJACCQQ000000000
SAMN15248356
SWRI18
GCA_014268395.2ContigJABWQK000000000
SAMN15248352
SWRI22
GCA_014269095.1ContigJABWRW000000000
SAMN15248313
SWRI50
GCA_014268825.1ContigJABWRG000000000
SAMN15248329
SWRI51
GCA_014269115.1ContigJABWRT000000000
SAMN15248316
SWRI59
GCA_014269235.1ContigJABWRX000000000
SAMN15248312
SWRI67
GCA_014269165.1ContigJABWRU000000000
SAMN15248315
SWRI68
GCA_014269105.1ContigJABWRV000000000
SAMN15248314
SWRI77
GCA_014268545.1ContigJABWQS000000000
SAMN15248343
SWRI81
GCA_014268685.1ContigJABWQY000000000
SAMN15248337
SWRI92
GCA_014270125.1ContigJABWQR000000000
SAMN15248344
SWRI99
GCA_014269085.1ScaffoldJABWRS000000000
SAMN15248317
RW7P2
GCA_014269045.1ContigJABWRR000000000
SAMN15248318
RW2S1
GCA_014268615.1ContigJABWQV000000000
SAMN15248340
SWRI196
GCA_014268445.2Complete genomeSAMN15248349
ZA 5.3
GCA_014268275.3Complete genomeSAMN15248358
SWRI145
GCA_019145375.1ContigJAHSTX000000000
SAMN19473660
SWRI88
GCA_014268815.2ContigJABWRE000000000
SAMN15248331
SWRI10
GCA_014268755.2Complete genomeSAMN15248333
RW8P3
GCA_014269035.2ContigJABWRP000000000
SAMN15248320
RW4S2
GCA_014268975.2Complete genomeSAMN15248322
RW3S1
GCA_014268885.2Complete genomeSAMN15248328
RW9S1A
GCA_019139835.1Complete genomeSAMN19473672
COR54
GCA_014268745.2ContigJABWRB000000000
SAMN15248334
SWRI12
GCA_014268485.2Complete genomeSAMN15248348
OE 48.2
SRA Data Details
ParameterValue
Data volume, Gbases58
Data volume, Mbytes34929

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