Vibrio parahaemolyticus (ID 503785) - BioProject

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Accession: PRJNA503785 ID: 503785

Vibrio parahaemolyticus

Vibrio parahaemolyticus Genome sequencing and assembly

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We isolated and sequenced five V. parahaemolyticus strains with different virulence level to identify the key virulent determinants that remarkably affected the pathogenicty.

Accession	PRJNA503785
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Vibrio parahaemolyticus[Taxonomy ID: 670] Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio parahaemolyticus
Publications	Fu S et al., "Horizontal Plasmid Transfer Promotes the Dissemination of Asian Acute Hepatopancreatic Necrosis Disease and Provides a Novel Mechanism for Genetic Exchange and Environmental Adaptation.", mSystems, 2020 Mar 17;5(2)
Submission	Registration date: 15-Jan-2020 Yellow Sea Fisheries Research Institute

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (Genomic DNA)	69
SRA Experiments	128
Protein Sequences	74453
Publications
PubMed	1
PMC	1
Other datasets
BioSample	159
Assembly	15

Assembly details:

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Assembly level

Number of Assemblies

Complete genome

Total

15
15

Assembly	Chrs	BioSample	Strain	Taxonomy
GCA_028609705.1	5	SAMN13706828	20150710009	Vibrio parahaemolyticus
GCA_028609685.1	5	SAMN13706805	20140723005	Vibrio parahaemolyticus
GCA_028609665.1	5	SAMN13706869	HZ-52	Vibrio parahaemolyticus
GCA_021730085.1	6	SAMN17188296	VP157	Vibrio parahaemolyticus
GCA_021730065.1	3	SAMN17188298	VP120	Vibrio parahaemolyticus
GCA_021730045.1	5	SAMN17188294	VP17	Vibrio parahaemolyticus
GCA_021730025.1	5	SAMN17188309	TJ-187	Vibrio parahaemolyticus
GCA_021730005.1	3	SAMN17188302	TJ-20	Vibrio parahaemolyticus
GCA_021729985.1	3	SAMN17188276	LH80	Vibrio parahaemolyticus
GCA_021729965.1	5	SAMN17188316	LH24	Vibrio parahaemolyticus
GCA_009883895.1	4	SAMN10436807	20151116002-3	Vibrio parahaemolyticus
GCA_009883875.1	7	SAMN10436808	20160303005-1	Vibrio parahaemolyticus
GCA_009883855.1	4	SAMN10436796	20140829008-1	Vibrio parahaemolyticus
GCA_009883835.1	5	SAMN10436686	20140722001-1	Vibrio parahaemolyticus
GCA_009883815.1	4	SAMN10436897	20140624012-1	Vibrio parahaemolyticus

SRA Data Details

Parameter	Value
Data volume, Gbases	123
Data volume, Mbytes	49821

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Vibrio parahaemolyticus

Vibrio parahaemolyticus Genome sequencing and assembly

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