ID 563711 - BioProject

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Accession: PRJNA563711 ID: 563711

Microbacteriaceae genomes sequencing and assembly

Genome sequences of plant-associated strains of the family Microbacteriaceae.

Accession	PRJNA563711
Data Type	Genome sequencing and assembly
Scope	Multispecies
Grants	"Enhancing diagnostics of plant pathogenic bacteria of the genus Rathayibacter" (Grant ID AP18PPQS&T00C159 (18-0422-000-FR), United States Department of Agriculture Animal and Plant Health Inspection Service)
Submission	Registration date: 3-Sep-2019 PSCBR RAS G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms RAS
Relevance	Comparative Analysis

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	70
WGS master	54
Genomic DNA	16
SRA Experiments	73
Protein Sequences	28163
Other datasets
BioSample	62
Assembly	62

Assembly details:

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Assembly level

Number of Assemblies

6
2
49
5
62

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_015351175.1	JADKRN000000000		SAMN16617043	VKM Ac-2874	Agreia pratensis
GCA_015351195.1	JADKRO000000000		SAMN16617044	VKM Ac-1790	Clavibacter michiganensis subsp. michiganensis
GCA_022815625.1	JALGRN000000000		SAMN26925151	VKM Ac-2921	Clavibacter phaseoli
GCA_015351135.1	JADKRP000000000		SAMN16617045	VKM Ac-2886	Clavibacter phaseoli
GCA_015351125.1	JADKRQ000000000		SAMN16617046	VKM Ac-2542	Clavibacter sp. VKM Ac-2542
GCA_015351105.1	JADKRR000000000		SAMN16617047	VKM Ac-2872	Clavibacter sp. VKM Ac-2872
GCA_015351075.1	JADKRS000000000		SAMN16617048	VKM Ac-2873	Clavibacter sp. VKM Ac-2873
GCA_015351095.1	JADKRT000000000		SAMN16617049	VKM Ac-1386	Curtobacterium flaccumfaciens
GCA_015351035.1	JADKRU000000000		SAMN16617050	VKM Ac-1795	Curtobacterium flaccumfaciens
GCA_015351025.1	JADKRV000000000		SAMN16617051	VKM Ac-1376	Curtobacterium sp. VKM Ac-1376
GCA_015350995.1	JADKRW000000000		SAMN16617052	VKM Ac-1393	Curtobacterium sp. VKM Ac-1393
GCA_015350975.1	JADKRX000000000		SAMN16617053	VKM Ac-1395	Curtobacterium sp. VKM Ac-1395
GCA_015351015.1	JADKRY000000000		SAMN16617054	VKM Ac-1796	Curtobacterium sp. VKM Ac-1796
GCA_013205045.1	JABMLI000000000		SAMN15006080	VKM Ac-2852	Curtobacterium sp. VKM Ac-2852
GCA_013204965.1	JABMLA000000000		SAMN15006088	VKM Ac-2861	Curtobacterium sp. VKM Ac-2861
GCA_015350905.1	JADKRZ000000000		SAMN16617055	VKM Ac-2865	Curtobacterium sp. VKM Ac-2865
GCA_015350945.1	JADKSA000000000		SAMN16617056	VKM Ac-2884	Curtobacterium sp. VKM Ac-2884
GCA_015350935.1	JADKSB000000000		SAMN16617057	VKM Ac-2887	Curtobacterium sp. VKM Ac-2887
GCA_015350855.1	JADKSC000000000		SAMN16617058	VKM Ac-2889	Curtobacterium sp. VKM Ac-2889
GCA_022815645.1	JALGRO000000000		SAMN26925152	VKM Ac-2922	Curtobacterium sp. VKM Ac-2922
GCA_015350895.1	JADKSD000000000		SAMN16617059	VKM Ac-1396	Frigoribacterium sp. VKM Ac-1396
GCA_015350835.1	JADKSE000000000		SAMN16617060	VKM Ac-2530	Frigoribacterium sp. VKM Ac-2530
GCA_013248995.1	JABRPK000000000		SAMN15006078	VKM Ac-2836	Frigoribacterium sp. VKM Ac-2836
GCA_013204925.1	JABMLC000000000		SAMN15006086	VKM Ac-2859	Frigoribacterium sp. VKM Ac-2859
GCA_013204975.1	JABMLB000000000		SAMN15006087	VKM Ac-2860	Frigoribacterium sp. VKM Ac-2860
GCA_015350875.1	JADKSF000000000		SAMN16617061	VKM Ac-2883	Frondihabitans sp. VKM Ac-2883
GCA_015350805.1	JADKSG000000000		SAMN16617062	VKM Ac-1786	Herbiconiux sp. VKM Ac-1786
GCA_013205105.1	JABMLJ000000000		SAMN15006079	VKM Ac-2851	Herbiconiux sp. VKM Ac-2851
GCA_013205085.1	JABMLH000000000		SAMN15006081	VKM Ac-2854	Microbacteriaceae bacterium VKM Ac-2854
GCA_013204985.1	JABMLG000000000		SAMN15006082	VKM Ac-2855	Microbacteriaceae bacterium VKM Ac-2855
GCA_015350795.1	JADKSH000000000		SAMN16617063	VKM Ac-2870	Microbacterium sp. VKM Ac-2870
GCA_022815605.1	JALGRP000000000		SAMN26925153	VKM Ac-2923	Microbacterium sp. VKM Ac-2923
GCA_015350715.1	JADKSI000000000		SAMN16617064	VKM Ac-2876	Plantibacter sp. VKM Ac-2876
GCA_015351235.1	JADKSJ000000000		SAMN16617065	VKM Ac-2880	Plantibacter sp. VKM Ac-2880
GCA_015351205.1	JADKSK000000000		SAMN16617066	VKM Ac-2885	Plantibacter sp. VKM Ac-2885
GCA_015351275.1	JADKSL000000000		SAMN16617067	VKM Ac-2867	Pseudoclavibacter sp. VKM Ac-2867
GCA_015351285.1	JADKSM000000000		SAMN16617068	VKM Ac-2888	Pseudoclavibacter sp. VKM Ac-2888
GCA_013249015.1	JABRPL000000000		SAMN15006076	VKM Ac-2828	Rathayibacter agropyri
GCA_022815585.1	JALGRQ000000000		SAMN26925154	VKM Ac-2924	Rathayibacter caricis
GCA_022815465.1	JALGRR000000000		SAMN26925155	VKM Ac-2925	Rathayibacter festucae
GCA_009834205.1		3	SAMN12724567	VKM Ac-2802	Rathayibacter festucae
GCA_009806955.1	WUCB00000000		SAMN12724560	VKM Ac-1602	Rathayibacter iranicus NCPPB 2253 = VKM Ac-1602
GCA_009806975.1	WUCA00000000		SAMN12724559	VKM Ac-1601	Rathayibacter rathayi NCPPB 2980 = VKM Ac-1601
GCA_009807095.1	WUCC00000000		SAMN12724561	VKM Ac-2754	Rathayibacter sp. VKM Ac-2754
GCA_009834225.1		4	SAMN12724562	VKM Ac-2759	Rathayibacter sp. VKM Ac-2759
GCA_009834185.1		3	SAMN12724563	VKM Ac-2760	Rathayibacter sp. VKM Ac-2760
GCA_009866585.1		1	SAMN12724565	VKM Ac-2762	Rathayibacter sp. VKM Ac-2762
GCA_009834245.1		2	SAMN12724566	VKM Ac-2801	Rathayibacter sp. VKM Ac-2801
GCA_009807175.1	WUCD00000000		SAMN12724568	VKM Ac-2803	Rathayibacter sp. VKM Ac-2803
GCA_009866655.1		1	SAMN12724569	VKM Ac-2804	Rathayibacter sp. VKM Ac-2804
GCA_009834265.1		1	SAMN12724570	VKM Ac-2805	Rathayibacter sp. VKM Ac-2805
GCA_013266705.1	JABSNQ000000000		SAMN15006077	VKM Ac-2835	Rathayibacter sp. VKM Ac-2835
GCA_013205055.1	JABMLF000000000		SAMN15006083	VKM Ac-2856	Rathayibacter sp. VKM Ac-2856
GCA_013205025.1	JABMLE000000000		SAMN15006084	VKM Ac-2857	Rathayibacter sp. VKM Ac-2857
GCA_013204935.1	JABMLD000000000		SAMN15006085	VKM Ac-2858	Rathayibacter sp. VKM Ac-2858
GCA_015351305.1	JADKSN000000000		SAMN16617069	VKM Ac-2878	Rathayibacter sp. VKM Ac-2878
GCA_015351245.1	JADKSO000000000		SAMN16617070	VKM Ac-2879	Rathayibacter sp. VKM Ac-2879
GCA_022815565.1	JALGRS000000000		SAMN26925156	VKM Ac-2926	Rathayibacter sp. VKM Ac-2926
GCA_022815525.1	JALGRT000000000		SAMN26925157	VKM Ac-2927	Rathayibacter sp. VKM Ac-2927
GCA_022815545.1	JALGRU000000000		SAMN26925158	VKM Ac-2928	Rathayibacter sp. VKM Ac-2928
GCA_022815495.1	JALGRV000000000		SAMN26925159	VKM Ac-2929	Rathayibacter sp. VKM Ac-2929
GCA_009834165.1		1	SAMN12724564	VKM Ac-2761	Rathayibacter tanaceti

SRA Data Details

Parameter	Value
Data volume, Gbases	138
Data volume, Mbytes	46246

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Microbacteriaceae genomes sequencing and assembly

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