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Accession: PRJNA577946 ID: 577946

Xenopus tropicalis strain:Nigerian (tropical clawed frog)

Xenopus tropicalis v10 Genome sequencing and assembly

See Genome Information for Xenopus tropicalis

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Xenopus tropicalis v10 genome sequencing and assembly

Accession	PRJNA577946
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Organism	Xenopus tropicalis[Taxonomy ID: 8364] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana; Xenopus tropicalis
Publications	Hellsten U et al., "The genome of the Western clawed frog Xenopus tropicalis.", Science, 2010 Apr 30;328(5978):633-6 Published online: Mitros T et al., "A chromosome-scale genome assembly and dense genetic map for Xenopus tropicalis", Developmental Biology, 2019;452(1):8-20
Grants	"Comparative Genetics and Genomics of Xenopus" (Grant ID R01 GM086321, National Institute of General Medical Sciences) "Systematic improvement of Xenopus gene annotations and reference genomes" (Grant ID R01 HD080708, National Institute of Child Health & Human Development)
Submission	Registration date: 16-Oct-2019 University of California, Berkeley
Relevance	Model Organism
Locus Tag Prefix	XENTR

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	71
WGS master	1
SRA Experiments	70
Protein Sequences	62998
Publications
PubMed	1
PMC	1
Other datasets
BioSample	1
Assembly	1

Assembly details:

Assembly	Level	WGS	Chrs	BioSample	Taxonomy
GCA_000004195.4	Chromosome	AAMC00000000	10	SAMN13041969	Xenopus tropicalis

SRA Data Details

Parameter	Value
Data volume, Gbases	451
Data volume, Tbytes	0.61

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Xenopus tropicalis strain:Nigerian
Xenopus tropicalis strain:Nigerian
Xenopus tropicalis v10 Genome sequencing and assembly

BioProject
BioProject Links for Protein (Select 1774925817) (1)
BioProject
Taxonomy Links for Protein (Select 1774925817) (1)
Taxonomy
SRPRB SRP receptor subunit beta [Homo sapiens]
SRPRB SRP receptor subunit beta [Homo sapiens]
Gene ID:58477

Gene
Gene Links for Nucleotide (Select 40850902) (1)
Gene

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