Warning: The NCBI web site requires JavaScript to function. more...

BioProject

Organizing biological data

Result Filters

Display Settings:

Format

Summary
BioProject ID list
Accessions List

Send to:

Choose Destination

File
Clipboard
Collections
My Bibliography

Links from Protein

Accession: PRJNA539822 ID: 539822

Bacterial soil isolates

Long-term Dormancy Experiment

Genome data and assemblies used in the experiment

Accession	PRJNA539822
Data Type	Genome sequencing and assembly
Scope	Multispecies
Grants	"Multidisciplinary University Research Initiatives" (Grant ID W911NF-14-1-0411, US Army Research Office) "Dimensions of Biodiversity" (Grant ID 1442246, National Science Foundation)
Submission	Registration date: 25-Apr-2019 Indiana University
Related Resources	Code for analysis
Relevance	Evolution

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	513
WGS master	8
Genomic DNA	17
SRA Experiments	38
Protein Sequences	102533
Other datasets
BioSample	19
Assembly	19

Assembly details:

Assembly level

Number of Assemblies

Complete genome

Complete genome

Contig

11
8
19

Assembly	Level	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_005937985.2			1	SAMN11620941	KBS0702	Arthrobacter sp. KBS0702
GCA_005937795.2			2	SAMN11620959	KBS0812	Bacillus sp. KBS0812
GCA_005937905.2			1	SAMN11620955	KBS0725	Bradyrhizobium sp. KBS0725
GCA_005937885.2			1	SAMN11620956	KBS0727	Bradyrhizobium sp. KBS0727
GCA_005937855.2			3	SAMN11620957	KBS0801	Burkholderia sp. KBS0801
GCA_005938005.2		VCCA00000000		SAMN11620951	KBS0715	Curtobacterium sp. KBS0715
GCA_005938025.2		VCCI00000000		SAMN11620943	KBS0705	Inquilinus sp. KBS0705
GCA_005937955.2		VCCE00000000		SAMN11620947	KBS0711	Janthinobacterium sp. KBS0711
GCA_005938675.2		VCCH00000000		SAMN11620944	KBS0706	Mycobacterium sp. KBS0706
GCA_005937995.2			1	SAMN11620953	KBS0722	Oerskovia sp. KBS0722
GCA_005938645.2			1	SAMN11620940	KBS0701	Pedobacter sp. KBS0701
GCA_006322025.2		VCCM00000000		SAMN11620938	ATCC 13985	Pseudomonas sp. ATCC 13985
GCA_005938665.2			1	SAMN11620939	ATCC 43928	Pseudomonas sp. ATCC 43928
GCA_005937945.2			3	SAMN11620945	KBS0707	Pseudomonas sp. KBS0707
GCA_005938045.2		VCCF00000000		SAMN11620946	KBS0710	Pseudomonas sp. KBS0710
GCA_005937845.2			2	SAMN11620958	KBS0802	Pseudomonas sp. KBS0802
GCA_005938745.2		VCBX00000000		SAMN11620954	KBS0724	Rhodococcus sp. KBS0724
GCA_006323185.2		VCCD00000000		SAMN11620948	KBS0712	Variovorax sp. KBS0712
GCA_005937895.2			1	SAMN11620949	KBS0713	Yersinia sp. KBS0713

SRA Data Details

Parameter	Value
Data volume, Gbases	44
Data volume, Mbytes	31513

Supplemental Content

Related information

Assembly
All related Assemblies
BioSample
All related BioSamples
Genome
Related Genomes
Genomic DNA
Link to genomic DNA records
Nucleotide
Related Nucleotide entry
Protein
Related Proteins
SRA
All related SRA Experiments
WGS master
Link to WGS master record(s)

Related Resources

Code for analysis
Code for analysis

LinkOut to external resources

2843621859: Oerskovia sp. KBS0722 [Integrated Microbial Genomes]
2843621859: Oerskovia sp. KBS0722
Integrated Microbial Genomes
2847900092: Bradyrhizobium sp. KBS0725 [Integrated Microbial Genomes]
2847900092: Bradyrhizobium sp. KBS0725
Integrated Microbial Genomes
2847907072: Bradyrhizobium sp. KBS0727 [Integrated Microbial Genomes]
2847907072: Bradyrhizobium sp. KBS0727
Integrated Microbial Genomes

Recent activity

Clear Turn Off Turn On

Bacterial soil isolates
Bacterial soil isolates
Long-term Dormancy Experiment

BioProject
BioProject Links for Protein (Select 1712811906) (1)
BioProject
A-type potassium channel modulatory protein KCNIP1 isoform 2 [Homo sapiens]
A-type potassium channel modulatory protein KCNIP1 isoform 2 [Homo sapiens]
gi|7657247|ref|NP_055407.1|

Protein
Homo sapiens taste 1 receptor member 1 (TAS1R1), transcript variant 3, mRNA
Homo sapiens taste 1 receptor member 1 (TAS1R1), transcript variant 3, mRNA
gi|1676319760|ref|NM_177540.3|

Nucleotide

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

You are here: NCBI