human skin metagenome (ID 471898) - BioProject

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Accession: PRJNA471898 ID: 471898

human skin metagenome

The skin microbiome of DOCK8-deficient patients

Dedicator of cytokinesis 8 (DOCK8) deficiency is a rare autosomal recessive, combined immunodeficiency that features cutaneous viral-associated manifestations, including molluscum contagiosum, herpesvirus infections, and warts (HPV infections) along with atopic dermatitis. More...

Accession	PRJNA471898
Data Type	Genome sequencing, Targeted Locus (Loci)
Scope	Multispecies
Publications	Tirosh O et al., "Expanded skin virome in DOCK8-deficient patients.", Nat Med, 2018 Dec;24(12):1815-1821
Submission	Registration date: 17-May-2018 NHGRI/NIH
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	256
Genomic DNA	254
Genomic RNA	2
SRA Experiments	347
Protein Sequences	1674
Publications
PubMed	1
PMC	1
Other datasets
BioSample	347
PopSet	5

SRA Data Details

Parameter	Value
Data volume, Gbases	792
Data volume, Tbytes	0.35

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BioProject Links for Protein (Select 1559669749) (1)
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human skin metagenome
human skin metagenome
The skin microbiome of DOCK8-deficient patients

BioProject
MAG: Human papillomavirus isolate HPV-mSK_180, partial genome
MAG: Human papillomavirus isolate HPV-mSK_180, partial genome
gi|1559669485|gb|MH777322.2|

Nucleotide
SRA Links for BioSample (Select 9907054) (1)
SRA
MULTISPECIES: formate dehydrogenase-N subunit alpha [unclassified Serratia (in: ...
MULTISPECIES: formate dehydrogenase-N subunit alpha [unclassified Serratia (in: enterobacteria)]
gi|1770743744|ref|WP_152562853.1|

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