De novo assembly into 35 contigs of the L. brazili... (ID 508027) - BioProject

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Accession: PRJEB25922 ID: 508027

De novo assembly into 35 contigs of the L. braziliensis MHOM/BR/75/M2904 strain using sequence reads generated by Illumina and PacBio.

De novo assembly of the L. braziliensis MHOM/BR/75/M2904 strain using sequence reads generated by two different NGS platforms, Illumina and PacBio. As a result, we are providing a complete assembly of the genome consisting of 35 contigs, one for each chromosome. In addition, we are providing a complete annotation of predicted genes.

Leishmania braziliensis is a parasitic protist, the causative agent of a type of leishmaniasis known as mucocutaneous leishmaniasis (MCL), in which lesions erupt at many sites on the nasopharyngeal mucosa as consequence of parasite multiplication. More...

Accession	PRJEB25922
Scope	Monoisolate
Publications	González-de la Fuente S et al., "Complete and de novo assembly of the Leishmania braziliensis (M2904) genome.", Mem Inst Oswaldo Cruz, 2018 Dec 10;114:e180438
Submission	Registration date: 3-Dec-2018 Centro Biologia Molecular Severo Ochoa (CBMSO)
Locus Tag Prefix	LBRM2904

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (Genomic DNA)	35
SRA Experiments	5
Protein Sequences	8227
Publications
PubMed	1
PMC	1
Other datasets
BioSample	6
Assembly	1

Assembly details:

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Assembly	Level	Chrs	BioSample	Taxonomy
GCA_900537975.2	Chromosome	35	SAMEA3469605	Leishmania braziliensis MHOM/BR/75/M2904

SRA Data Details

Parameter	Value
Data volume, Gbases	23
Data volume, Mbytes	42969

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De novo assembly into 35 contigs of the L. braziliensis MHOM/BR/75/M2904 strain using sequence reads generated by Illumina and PacBio.

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