ID 485019 - BioProject

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Accession: PRJNA485019 ID: 485019

PacBio sequencing of 10 host-associated marine bacteria genomes

High-quality, completed genomes are of critical importance for the understanding of the functions of marine bacteria and their interactions with host organisms. More...

Accession	PRJNA485019
Data Type	Genome sequencing
Scope	Multispecies
Submission	Registration date: 8-Aug-2018 University of New South Wales
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (Genomic DNA)	22
SRA Experiments	1
Protein Sequences	40877
Other datasets
BioSample	11
Assembly	10

Assembly details:

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Assembly level

Number of Assemblies

Complete genome

Total

10
10

Assembly	Chrs	BioSample	Strain	Taxonomy
GCA_003443615.1	1	SAMN09780815	BL110	Alteromonas sp. BL110
GCA_003443695.1	1	SAMN09780816	AD1	Aquimarina sp. AD1
GCA_003443715.1	1	SAMN09780817	AD10	Aquimarina sp. AD10
GCA_003443675.1	1	SAMN09780819	BL5	Aquimarina sp. BL5
GCA_003443635.1	1	SAMN09780818	AU392	Flavobacteriaceae bacterium
GCA_003443575.1	4	SAMN09780823	BS107	Phaeobacter inhibens
GCA_003443555.1	4	SAMN09780822	2.10	Phaeobacter inhibens
GCA_003443595.1	5	SAMN09780821	LSS9	Phaeobacter sp. LSS9
GCA_003568825.1	2	SAMN09780820	D2	Pseudoalteromonas tunicata
GCA_003443535.1	2	SAMN09780824	AD91A	Ruegeria sp. AD91A

SRA Data Details

Parameter	Value
Data volume, Gbases	16
Data volume, Mbytes	53872

Supplemental Content

Related information

Assembly
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BioSample
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Genome
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Genomic DNA
Link to genomic DNA records
Nucleotide
Related Nucleotide entry
Protein
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Related Genes
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SRA
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LinkOut to external resources

2840609097: Ruegeria sp. AD91A [Integrated Microbial Genomes]
2840609097: Ruegeria sp. AD91A
Integrated Microbial Genomes
2841412109: Phaeobacter inhibens 2.10 [Integrated Microbial Genomes]
2841412109: Phaeobacter inhibens 2.10
Integrated Microbial Genomes
2841416095: Phaeobacter inhibens BS107 [Integrated Microbial Genomes]
2841416095: Phaeobacter inhibens BS107
Integrated Microbial Genomes
SILVA LSU Database [SILVA]
SILVA LSU Database
SILVA
SILVA SSU Database [SILVA]
SILVA SSU Database
SILVA

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BioProject Links for Protein (Select 1468714176) (1)
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BioAssay, by Gene target for Gene (Select 353211) (3)
PubChem BioAssay
PREDICTED: Corvus kubaryi interleukin 22 receptor subunit alpha 2 (IL22RA2), tra...
PREDICTED: Corvus kubaryi interleukin 22 receptor subunit alpha 2 (IL22RA2), transcript variant X2, mRNA
gi|2052112510|ref|XM_042017497.1|

Nucleotide
PREDICTED: Mus musculus prune homolog 2 (Prune2), transcript variant X7, mRNA
PREDICTED: Mus musculus prune homolog 2 (Prune2), transcript variant X7, mRNA
gi|1907132533|ref|XM_017318227.3|

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