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Accession: PRJNA393433 ID: 393433

Trichoplax sp. H2 strain:Panama

Trichoplax sp. H2 and endosymbiont genome sequencing

Trichoplax sp. H2 is the closest relative of the single described placozoan species Trichoplax adhaerens that is accessible in lab cultures. More...

Accession	PRJNA393433
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Trichoplax sp. H2[Taxonomy ID: 287889] Eukaryota; Metazoa; Placozoa; Uniplacotomia; Trichoplacea; Trichoplacidae; Trichoplax; Trichoplax sp. H2
Publications	Kamm K et al., "Trichoplax genomes reveal profound admixture and suggest stable wild populations without bisexual reproduction.", Sci Rep, 2018 Jul 24;8(1):11168
Grants	"Placozoan Taxonomy" (Grant ID Schi 277/26-1, Deutsche Forschungsgemeinschaft) "Untersuchung ökologischer Faktoren zur Arteinnischung und Verteilung der Placozoen" (Grant ID Schi 277/29-1, Deutsche Forschungsgemeinschaft)
Submission	Registration date: 27-Jul-2018 University of Veterinary Medicine Hannover, Foundation
Relevance	Evolution

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	846
WGS master	2
TSA master	1
SRA Experiments	3
Protein Sequences	8065
Publications
PubMed	1
PMC	1
Other datasets
BioSample	2
Assembly	2

Assembly details:

Assembly level

Number of Assemblies

Scaffold

2
2

Assembly	Level	WGS	BioSample	Infraspecies Id	Taxonomy
GCA_009690945.1		NPHZ00000000	SAMN07339320	REH2	Rickettsiales endosymbiont of Trichoplax sp. H2
GCA_003344405.1		NOWV00000000	SAMN07333237	Panama	Trichoplax sp. H2

SRA Data Details

Parameter	Value
Data volume, Gbases	20
Data volume, Mbytes	10161

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LinkOut to external resources

GOLD: Gp0492884 [Genomes On Line Database]
GOLD: Gp0492884
Genomes On Line Database
SILVA LSU Database [SILVA]
SILVA LSU Database
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SILVA SSU Database [SILVA]
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Trichoplax sp. H2 strain:Panama
Trichoplax sp. H2 strain:Panama
Trichoplax sp. H2 and endosymbiont genome sequencing

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