hot springs metagenome (ID 419931) - BioProject

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Accession: PRJNA419931 ID: 419931

hot springs metagenome

Metagenomic assembled genomes from two thermal pools in the Uzon Caldera, Kamchatka, Russia

In this study we focus on two hydrothermal pools, Arkashin Shurf and Zavarzin Spring, in Uzon Caldera, Kamchatka, Russia that were previously characterized using 16S ribosomal RNA sequencing and geochemical analysis undertaken in Burgess et al. More...

Accession	PRJNA419931
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	hot springs metagenome[Taxonomy ID: 433727] unclassified sequences; metagenomes; ecological metagenomes; hot springs metagenome
Publications	Wilkins LGE et al., "Metagenome-assembled genomes provide new insight into the microbial diversity of two thermal pools in Kamchatka, Russia.", Sci Rep, 2019 Feb 28;9(1):3059 Published online: Wilkins L et al., "Metagenome-assembled genomes provide new insight into the microbial diversity of two thermal pools in Kamchatka, Russia", Scientific Reports, 2019;9(1)
Submission	Registration date: 9-Jan-2018 UC Berkeley
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	7347
WGS master	35
SRA Experiments	4
Protein Sequences	50837
Publications
PubMed	1
PMC	1
Other datasets
BioSample	40
Assembly	35

Genome assemblies, organelles and plasmids:

Assembly GCA_002869475.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PKSC00000000

Assembly GCA_002871215.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PNIM00000000

Assembly GCA_002871235.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PNIC00000000

Assembly GCA_002871245.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PNIH00000000

Assembly GCA_002871255.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PNIF00000000

Assembly GCA_002871295.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PNIV00000000

Assembly GCA_002877795.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PNHZ00000000

Assembly GCA_002877815.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PNIQ00000000

Assembly GCA_002877835.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PNIR00000000

Assembly GCA_002877855.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PNIA00000000

Assembly GCA_002877875.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PNIE00000000

Assembly GCA_002877885.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PNID00000000

Assembly GCA_002877915.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PNJE00000000

Assembly GCA_002877935.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PNIG00000000

Assembly GCA_002877955.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PNIL00000000

Assembly GCA_002877975.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PNII00000000

Assembly GCA_002877985.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PNIK00000000

Assembly GCA_002878015.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PNIJ00000000

Assembly GCA_002878035.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PNIU00000000

Assembly GCA_002878055.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PNIO00000000

Assembly GCA_002878065.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PNIN00000000

Assembly GCA_002878095.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PNIY00000000

Assembly GCA_002878115.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PNIX00000000

Assembly GCA_002878125.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PNJD00000000

Assembly GCA_002878135.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PNIT00000000

Assembly GCA_002878175.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PNIZ00000000

Assembly GCA_002878195.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PNJF00000000

Assembly GCA_002878215.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PNJC00000000

Assembly GCA_002878225.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PNJB00000000

Assembly GCA_002878235.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PNJA00000000

Assembly GCA_002878315.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PNIW00000000

Assembly GCA_002878335.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PNIP00000000

Assembly GCA_002899755.1 :

Name	GenBank
Whole Genome Shotgun Assembly	POCC00000000

Assembly GCA_002899805.1 :

Name	GenBank
Whole Genome Shotgun Assembly	POCB00000000

Assembly GCA_002899815.1 :

Name	GenBank
Whole Genome Shotgun Assembly	PNIB00000000

SRA Data Details

Parameter	Value
Data volume, Gbases	9
Data volume, Mbytes	5340

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hot springs metagenome

Metagenomic assembled genomes from two thermal pools in the Uzon Caldera, Kamchatka, Russia

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