microbial mat metagenome (ID 283228) - BioProject

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Accession: PRJNA283228 ID: 283228

microbial mat metagenome

Hot Lake Unicyanobacterial Consortia

Microbial autotroph-heterotroph interactions influence biogeochemical cycles on a global scale, but the diversity and complexity of natural systems and their intractability to in situ manipulation make it challenging to elucidate the principles governing these interactions. More...

Accession	PRJNA283228
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	microbial mat metagenome[Taxonomy ID: 527640] unclassified sequences; metagenomes; ecological metagenomes; microbial mat metagenome
Publications	Nelson WC et al., "Identification and Resolution of Microdiversity through Metagenomic Sequencing of Parallel Consortia.", Appl Environ Microbiol, 2016 Jan 1;82(1):255-67 Cole JK et al., "Phototrophic biofilm assembly in microbial-mat-derived unicyanobacterial consortia: model systems for the study of autotroph-heterotroph interactions.", Front Microbiol, 2014;5:109
Submission	Registration date: 14-Oct-2015 Pacific Northwest National Laboratroy
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	2064
WGS master	20
Genomic DNA	3
SRA Experiments	331
Protein Sequences	63471
Publications
PubMed	2
PMC	2
Other datasets
BioSample	26
Assembly	21

Genome assemblies, organelles and plasmids:

Assembly GCA_001314525.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLEX00000000

Assembly GCA_001314535.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LKOZ00000000

Assembly GCA_001314545.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LIHN00000000

Assembly GCA_001314555.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LIHO00000000

Assembly GCA_001314605.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LIHP00000000

Assembly GCA_001314625.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LJSH00000000

Assembly GCA_001314645.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LJSG00000000

Assembly GCA_001314655.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LJSF00000000

Assembly GCA_001314685.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LJNT00000000

Assembly GCA_001314705.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LJSU00000000

Assembly GCA_001314715.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LJSV00000000

Assembly GCA_001314745.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LJST00000000

Assembly GCA_001314765.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LJSW00000000

Assembly GCA_001314785.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LJSX00000000

Assembly GCA_001314805.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LJSY00000000

Assembly GCA_001314815.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LJXT00000000

Assembly GCA_001314845.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LJZQ00000000

Assembly GCA_001314865.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LJZR00000000

Assembly GCA_001314875.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LJZS00000000

Assembly GCA_001314905.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LJZT00000000

Assembly GCA_002813895.1 :

Name	GenBank
Chromosome	CP024912.1
Plasmid	CP024913.1
Plasmid	CP024914.1

SRA Data Details

Parameter	Value
Data volume, Gbases	58
Data volume, Mbytes	43467

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microbial mat metagenome

Hot Lake Unicyanobacterial Consortia

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