Enterobacteriaceae (ID 287968) - BioProject

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Accession: PRJNA287968 ID: 287968

Enterobacteriaceae

Enterobacteriaceae Genome sequencing and assembly

Phenotypic and genotypic characterisation of carbapenemase-producing Enterobacteriaceae

Accession	PRJNA287968
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Enterobacteriaceae[Taxonomy ID: 543] Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae
Publications	Osei Sekyere J et al., "Genomic and phenotypic characterisation of fluoroquinolone resistance mechanisms in Enterobacteriaceae in Durban, South Africa.", PLoS One, 2017;12(6):e0178888
Submission	Registration date: 15-Oct-2015 University of KwaZulu Natal

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	11906
WGS master	46
Genomic DNA	9
SRA Experiments	48
Protein Sequences	258547
Publications
PubMed	1
PMC	1
Other datasets
BioSample	49
Assembly	48

Assembly details:

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Assembly level

Number of Assemblies

1
1
46
48

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_001316675.1	LJEB00000000		SAMN04011435	ST62:944112508	Citrobacter freundii
GCA_001317155.2	LJET00000000		SAMN04011453	953086287	Citrobacter freundii
GCA_001317135.2	LJES00000000		SAMN04011451	ST63:944526466	Citrobacter freundii
GCA_001316445.2	LJDJ00000000		SAMN03792301	ST252:19870317JSK	Enterobacter asburiae
GCA_001317235.2	LJEY00000000		SAMN04011459	ST435:939705067	Enterobacter asburiae
GCA_001317125.2	LJER00000000		SAMN04011452	ST252:950126202	Enterobacter asburiae
GCA_001317435.1	LJEZ00000000		SAMN04011460	ST436:951358951	Enterobacter cloacae subsp. cloacae
GCA_001316815.2	LJDP00000000		SAMN04011424	ST145:950180354	Enterobacter hormaechei subsp. hoffmannii
GCA_001316615.1	LJDV00000000		SAMN04011429	ST108:941726609	Enterobacter hormaechei
GCA_001317225.2	LJEW00000000		SAMN04011456	ST434:953099839	Enterobacter kobei
GCA_001316705.2	LJED00000000		SAMN04011437	ST54:941713674	Enterobacter kobei
GCA_001317055.2	LJEO00000000		SAMN04011448	ST433:953102574	Enterobacter roggenkampii
GCA_001316805.2	LJDO00000000		SAMN04011422	ST121:950178628	Enterobacter sp. ST121:950178628
GCA_001316875.2	LJDY00000000		SAMN04011432	ST167:947385799	Escherichia coli
GCA_001317245.2	LJFC00000000		SAMN04011463	ST170:939742031	Klebsiella michiganensis
GCA_001316565.3		3	SAMN04011426	ST101:960186733	Klebsiella pneumoniae subsp. pneumoniae
GCA_001316945.3		5	SAMN04011439	ST2017:950142398	Klebsiella pneumoniae subsp. pneumoniae
GCA_001317295.2	LJFE00000000		SAMN04011455	ST101:951363981	Klebsiella pneumoniae subsp. pneumoniae
GCA_001317015.2	LJEL00000000		SAMN04011445	ST101:957083320	Klebsiella pneumoniae subsp. pneumoniae
GCA_001316895.2	LJDZ00000000		SAMN04011434	ST2016:951362657	Klebsiella pneumoniae subsp. pneumoniae
GCA_001316955.2	LJEI00000000		SAMN04011442	ST101:957083896	Klebsiella pneumoniae subsp. pneumoniae
GCA_001317035.2	LJEN00000000		SAMN04011447	ST101:U44822 (26/7/13)	Klebsiella pneumoniae subsp. pneumoniae
GCA_001317005.2	LJEK00000000		SAMN04011444	ST101:957089165	Klebsiella pneumoniae subsp. pneumoniae
GCA_001316985.2	LJEJ00000000		SAMN04011443	ST101:951384356	Klebsiella pneumoniae subsp. pneumoniae
GCA_001316765.2	LJEH00000000		SAMN04011441	ST2017:950118422	Klebsiella pneumoniae subsp. pneumoniae
GCA_001316925.2	LJEF00000000		SAMN04011440	ST2017:950117510	Klebsiella pneumoniae subsp. pneumoniae
GCA_001317375.2	LJEM00000000		SAMN04011446	ST101:945154233	Klebsiella pneumoniae subsp. pneumoniae
GCA_001317165.2	LJEU00000000		SAMN04011454	ST101:939996824	Klebsiella pneumoniae subsp. pneumoniae
GCA_001316495.2	LJDK00000000		SAMN04011419	ST101:950171785	Klebsiella pneumoniae subsp. pneumoniae
GCA_001316645.2	LJEA00000000		SAMN04011433	ST101:951373950	Klebsiella pneumoniae subsp. pneumoniae
GCA_001316865.2	LJDW00000000		SAMN04011430	ST14:944535499	Klebsiella pneumoniae subsp. pneumoniae
GCA_001316695.2	LJEC00000000		SAMN04011436	ST101:945165838	Klebsiella pneumoniae subsp. pneumoniae
GCA_001316845.2	LJDR00000000		SAMN04011425	ST323:941530379	Klebsiella pneumoniae subsp. pneumoniae
GCA_001316745.2	LJEE00000000		SAMN04011438	ST101:945169659	Klebsiella pneumoniae subsp. pneumoniae
GCA_001316785.2	LJDN00000000		SAMN04011420	ST101:950173000	Klebsiella pneumoniae subsp. pneumoniae
GCA_001317095.1	LJEQ00000000		SAMN04011450	ST1478:939997103	Klebsiella variicola
GCA_001317285.2	LJFD00000000		SAMN04011464	950165859	Serratia marcescens
GCA_001317455.2	LJFB00000000		SAMN04011462	950163360	Serratia marcescens
GCA_001316555.2	LJDS00000000		SAMN04011427	950196656	Serratia marcescens
GCA_001316595.2	LJDU00000000		SAMN04011428	950005607	Serratia marcescens
GCA_001316535.2	LJDQ00000000		SAMN04011423	950172946/950172838	Serratia marcescens
GCA_001316425.2	LJDL00000000		SAMN04011421	950174583	Serratia marcescens
GCA_001317085.2	LJEP00000000		SAMN04011449	946252515	Serratia marcescens
GCA_001316635.2	LJDX00000000		SAMN04011431	9501453777	Serratia marcescens
GCA_001317425.2	LJEX00000000		SAMN04011458	945174350	Serratia marcescens
GCA_001317205.2	LJEV00000000		SAMN04011457	945154301	Serratia marcescens
GCA_001316505.2	LJDM00000000		SAMN04011418	950164094	Serratia marcescens
GCA_001317445.2	LJFA00000000		SAMN04011461	950166381	Serratia marcescens

SRA Data Details

Parameter	Value
Data volume, Gbases	23
Data volume, Mbytes	15113

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Enterobacteriaceae

Enterobacteriaceae Genome sequencing and assembly

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