ID 388336 - BioProject

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Accession: PRJNA388336 ID: 388336

Ensifer meliloti PacBio Sequencing

10 Ensifer meliloti genomes were sequenced using PacBio. This offers insight into how the independent replicons of Ensifer evolve and intra- and inter-replicon gene transfer. More...

Accession	PRJNA388336
Data Type	Genome sequencing
Scope	Multispecies
Grants	"Expanding the Medicago truncatula Hapmap as a Platform for Exploring the Genetics of Legume Symbioses" (Grant ID 1237993, National Science Foundation)
Submission	Registration date: 29-May-2017 University of Minnesota
Relevance	Evolution

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (Genomic DNA)	40
SRA Experiments	15
Protein Sequences	64673
Other datasets
BioSample	10
Assembly	10

Assembly details:

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Assembly level

Number of Assemblies

Complete genome

Total

10
10

Assembly	Chrs	BioSample	Strain	Taxonomy
GCA_002197465.1	3	SAMN07175162	KH46	Sinorhizobium meliloti
GCA_002197445.1	4	SAMN07175167	USDA1021	Sinorhizobium meliloti
GCA_002197105.1	4	SAMN07175161	KH35c	Sinorhizobium meliloti
GCA_002197125.1	4	SAMN07175163	M162	Sinorhizobium meliloti
GCA_002197165.1	4	SAMN07175160	HM006	Sinorhizobium meliloti
GCA_002197145.1	4	SAMN07175166	T073	Sinorhizobium meliloti
GCA_002197085.1	6	SAMN07175164	M270	Sinorhizobium meliloti
GCA_002197065.1	3	SAMN07175168	USDA1106	Sinorhizobium meliloti
GCA_002197025.1	4	SAMN07175169	USDA1157	Sinorhizobium meliloti
GCA_002197045.1	4	SAMN07175165	Rm41	Sinorhizobium meliloti

SRA Data Details

Parameter	Value
Data volume, Gbases	9
Data volume, Mbytes	32967

Supplemental Content

Related information

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Genome
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Genomic DNA
Link to genomic DNA records
Nucleotide
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Protein
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Related Genes
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SRA
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LinkOut to external resources

2847403270: Sinorhizobium meliloti KH46 [Integrated Microbial Genomes]
2847403270: Sinorhizobium meliloti KH46
Integrated Microbial Genomes
2848985563: Sinorhizobium meliloti KH35c [Integrated Microbial Genomes]
2848985563: Sinorhizobium meliloti KH35c
Integrated Microbial Genomes
2847388547: Sinorhizobium meliloti Rm41 [Integrated Microbial Genomes]
2847388547: Sinorhizobium meliloti Rm41
Integrated Microbial Genomes
SILVA LSU Database [SILVA]
SILVA LSU Database
SILVA
SILVA SSU Database [SILVA]
SILVA SSU Database
SILVA

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BioProject Links for Protein (Select 1226728051) (1)
BioProject
Homo sapiens unc-84 homolog B (C. elegans), mRNA (cDNA clone MGC:133056 IMAGE:40...
Homo sapiens unc-84 homolog B (C. elegans), mRNA (cDNA clone MGC:133056 IMAGE:40008756), complete cds
gi|84627528|gb|BC111717.1|

Nucleotide
Plcd4 phospholipase C, delta 4 [Mus musculus]
Plcd4 phospholipase C, delta 4 [Mus musculus]
Gene ID:18802

Gene
Gene Links for Protein (Select 125347158) (1)
Gene

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