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Accession: PRJNA369279 ID: 369279

Lonchura striata domestica isolate:white83orange57 (white-rumped munia)

Lonchura striata domestica isolate:white83orange57 Genome sequencing and assembly

See Genome Information for Lonchura striata
Balancing the flexibility and stability of behavior is a fundamental aspect of neural function, underlying both normal motor function and its disruption in neurodegenerative diseases like Parkinson's and Huntington's diseases. More...
AccessionPRJNA369279
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismLonchura striata[Taxonomy ID: 299123]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura; Lonchura striata; Lonchura striata
Publications
  • Colquitt BM et al., "Draft genome assembly of the Bengalese finch, Lonchura striata domestica, a model for motor skill variability and learning.", Gigascience, 2018 Mar 1;7(3):1-6
  • Yang F et al., "Complete mitochondrial genome of White-rumped Munia Lonchura striata swinhoei (Passeriformes: Estrildidae).", Mitochondrial DNA A DNA Mapp Seq Anal, 2016 Jul;27(4):3028-9
Grants
  • "The systems-level transcriptional architecture of song plasticity in songbirds" (Grant ID F32 NS098809, National Institute of Neurological Disorders and Stroke)
  • "HHMI investigator" (Grant ID HHMI_Brainard_M, Howard Hughes Medical Institute)
SubmissionRegistration date: 19-Jun-2017
HHMI/UCSF
RelevanceModel Organism
Locus Tag PrefixRLOC
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)969
WGS master2
SRA Experiments33
Protein Sequences15317
Publications
PubMed2
PMC1
Other datasets
BioSample30
Assembly2
SRA Data Details
ParameterValue
Data volume, Gbases508
Data volume, Tbytes0.26
Related Project Category: RefseqGenbank
PRJNA391487 : Lonchura striata domestica isolate:white83orange57 RefSeq Genome sequencing

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