| Publications (total 24) Less... | - Addetia A et al., "In Vivo Generation of BK and JC Polyomavirus Defective Viral Genomes in Human Urine Samples Associated with Higher Viral Loads.", J Virol, 2021 May 24;95(12)
More...- Addetia A et al., "In Vivo Generation of BK and JC Polyomavirus Defective Viral Genomes in Human Urine Samples Associated with Higher Viral Loads.", J Virol, 2021 May 24;95(12)
- Ramchandani MS et al., "Viral Genetics Modulate Orolabial Herpes Simplex Virus Type 1 Shedding in Humans.", J Infect Dis, 2019 Mar 15;219(7):1058-1066
- Shean RC et al., "VAPiD: a lightweight cross-platform viral annotation pipeline and identification tool to facilitate virus genome submissions to NCBI GenBank.", BMC Bioinformatics, 2019 Jan 23;20(1):48
- Vasireddy R et al., "Mycobacterium talmoniae, a Potential Pulmonary Pathogen Isolated from Multiple Patients with Bronchiectasis in the United States, Including the First Case of Clinical Disease in a Patient with Cystic Fibrosis.", J Clin Microbiol, 2019 Feb;57(2)
- Casto AM et al., "Prospective, Real-time Metagenomic Sequencing During Norovirus Outbreak Reveals Discrete Transmission Clusters.", Clin Infect Dis, 2019 Aug 30;69(6):941-948
- Roberts MC et al., "The human clone ST22 SCCmec IV methicillin-resistant Staphylococcus aureus isolated from swine herds and wild primates in Nepal: is man the common source?", FEMS Microbiol Ecol, 2018 May 1;94(5)
- Qin X et al., "Heterogeneous Antimicrobial Susceptibility Characteristics in Pseudomonas aeruginosa Isolates from Cystic Fibrosis Patients.", mSphere, 2018 Mar-Apr;3(2)
- Greninger AL et al., "Comparative genomic, transcriptomic, and proteomic reannotation of human herpesvirus 6.", BMC Genomics, 2018 Mar 20;19(1):204
- Greninger AL et al., "Ultrasensitive Capture of Human Herpes Simplex Virus Genomes Directly from Clinical Samples Reveals Extraordinarily Limited Evolution in Cell Culture.", mSphere, 2018 Jun 27;3(3)
- Iketani S et al., "Viral Entry Properties Required for Fitness in Humans Are Lost through Rapid Genomic Change during Viral Isolation.", mBio, 2018 Jul 3;9(4)
- Dalmat RR et al., "Limited Marginal Utility of Deep Sequencing for HIV Drug Resistance Testing in the Age of Integrase Inhibitors.", J Clin Microbiol, 2018 Dec;56(12)
- Makhsous N et al., "Isolation and characterization of the fall Chinook aquareovirus.", Virol J, 2017 Sep 5;14(1):170
- Bateman AC et al., "Conservation and Recombination in the Genome Sequence of Haemophilus influenzae Type f WAPHL1.", Genome Announc, 2017 Sep 21;5(38)
- Johnston C et al., "Highly conserved intragenic HSV-2 sequences: Results from next-generation sequencing of HSV-2 U(L) and U(S) regions from genital swabs collected from 3 continents.", Virology, 2017 Oct;510:90-98
- Shean RC et al., "Draft Genome Sequences of Six Novel Picorna-Like Viruses from Washington State Spiders.", Genome Announc, 2017 Mar 2;5(9)
- Koelle DM et al., "Worldwide circulation of HSV-2 × HSV-1 recombinant strains.", Sci Rep, 2017 Mar 13;7:44084
- Greninger AL et al., "Copy Number Heterogeneity of JC Virus Standards.", J Clin Microbiol, 2017 Mar;55(3):824-831
- Bateman AC et al., "Quantification of BK Virus Standards by Quantitative Real-Time PCR and Droplet Digital PCR Is Confounded by Multiple Virus Populations in the WHO BKV International Standard.", Clin Chem, 2017 Mar;63(3):761-769
- Greninger AL et al., "Rule-Out Outbreak: 24-Hour Metagenomic Next-Generation Sequencing for Characterizing Respiratory Virus Source for Infection Prevention.", J Pediatric Infect Dis Soc, 2017 Jun 1;6(2):168-172
- Ogimi C et al., "Prolonged Shedding of Human Coronavirus in Hematopoietic Cell Transplant Recipients: Risk Factors and Viral Genome Evolution.", J Infect Dis, 2017 Jul 15;216(2):203-209
- Greninger AL et al., "Rapid Metagenomic Next-Generation Sequencing during an Investigation of Hospital-Acquired Human Parainfluenza Virus 3 Infections.", J Clin Microbiol, 2017 Jan;55(1):177-182
- Makhsous N et al., "Genome Sequences of Three Novel Bunyaviruses, Two Novel Rhabdoviruses, and One Novel Nyamivirus from Washington State Moths.", Genome Announc, 2017 Feb 16;5(7)
- Johnston C et al., "Dual-strain genital herpes simplex virus type 2 (HSV-2) infection in the US, Peru, and 8 countries in sub-Saharan Africa: A nested cross-sectional viral genotyping study.", PLoS Med, 2017 Dec;14(12):e1002475
- Greninger AL et al., "Draft Genome Sequence of Goose Dicistrovirus.", Genome Announc, 2016 Mar 3;4(2)
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