Mycobacterium (ID 315990) - BioProject

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Accession: PRJNA315990 ID: 315990

Mycobacterium

Mycobacterium abscessus complex genome sequencing

See Genome Information for Mycobacteroides abscessus

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171 additional projects are related by organism.

Whole genome sequencing of M. abscessus complex isolates.

Accession	PRJNA315990
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Mycobacterium[Taxonomy ID: 1763] Bacteria; Bacillati; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycobacterium
Publications	Caverly LJ et al., "Complete Genome Sequence of Mycobacterium abscessus subsp. bolletii.", Genome Announc, 2016 Jun 9;4(3)
Submission	Registration date: 16-May-2017 University of Michigan Medical School
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	1931
WGS master	53
Genomic DNA	27
SRA Experiments	75
Protein Sequences	252874
Publications
PubMed	1
PMC	1
Other datasets
BioSample	76
Assembly	76

Assembly details:

Download

Assembly level

Number of Assemblies

Complete genome

Contig

Total

23
53
76

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_030509745.1	JAULCM000000000		SAMN35656224	FLAC1199	Mycobacterium avium subsp. hominissuis
GCA_030509665.1	JAULCN000000000		SAMN35656223	FLAC1176	Mycobacterium avium subsp. hominissuis
GCA_030509685.1	JAULCO000000000		SAMN35656222	FLAC1172	Mycobacterium avium subsp. hominissuis
GCA_030509695.1	JAULCL000000000		SAMN35656230	FLAC1377	Mycobacterium avium subsp. hominissuis
GCA_030509765.1	JAULCP000000000		SAMN35656217	FLAC0813	Mycobacterium avium subsp. hominissuis
GCA_030509805.1	JAULCQ000000000		SAMN35656214	FLAC0622	Mycobacterium avium subsp. hominissuis
GCA_002292785.1	NSFI00000000		SAMN07528782	FLAC0130	Mycobacterium avium
GCA_002292745.1	NSEU00000000		SAMN07528798	FLAC0376	Mycobacterium avium
GCA_002292735.1	NSEZ00000000		SAMN07528793	FLAC0257	Mycobacterium avium
GCA_002292725.1	NSEY00000000		SAMN07528794	FLAC0260	Mycobacterium avium
GCA_002292705.1	NSEV00000000		SAMN07528797	FLAC0371	Mycobacterium avium
GCA_002292655.1	NSFM00000000		SAMN07528777	FLAC0059	Mycobacterium avium
GCA_002292635.1	NSFJ00000000		SAMN07528781	FLAC0117	Mycobacterium avium
GCA_002292595.1	NSFH00000000		SAMN07528784	FLAC0146	Mycobacterium avium
GCA_002292585.1	NSFG00000000		SAMN07528785	FLAC0155	Mycobacterium avium
GCA_002292545.1	NSFD00000000		SAMN07528788	FLAC0165	Mycobacterium avium
GCA_002292505.1	NSFF00000000		SAMN07528786	FLAC0161	Mycobacterium avium
GCA_002292475.1	NSFB00000000		SAMN07528791	FLAC0216	Mycobacterium avium
GCA_002292445.1	NSEW00000000		SAMN07528796	FLAC0351	Mycobacterium avium
GCA_002292435.1	NSFA00000000		SAMN07528792	FLAC0256	Mycobacterium avium
GCA_002292425.1	NSEX00000000		SAMN07528795	FLAC0346	Mycobacterium avium
GCA_030342005.1	JASZZR000000000		SAMN35656229	FLAC1350	Mycobacterium intracellulare subsp. chimaera
GCA_030342145.1	JASZZX000000000		SAMN35656220	FLAC1071	Mycobacterium intracellulare subsp. chimaera
GCA_030342125.1	JASZZY000000000		SAMN35656219	FLAC1020	Mycobacterium intracellulare subsp. chimaera
GCA_030341965.1	JASZZQ000000000		SAMN35656231	FLAC1379	Mycobacterium intracellulare
GCA_002292535.1	NSFE00000000		SAMN07528787	FLAC0162	Mycobacterium intracellulare
GCA_002292525.1	NSFC00000000		SAMN07528790	FLAC0204	Mycobacterium intracellulare
GCA_002292645.1	NSFL00000000		SAMN07528778	FLAC0063	Mycobacterium intracellulare subsp. chimaera
GCA_002292625.1	NSFK00000000		SAMN07528779	FLAC0067	Mycobacterium intracellulare subsp. chimaera
GCA_002287605.1		3	SAMN07528780	FLAC0070	Mycobacterium intracellulare subsp. chimaera
GCA_002285695.1		1	SAMN07528783	FLAC0133	Mycobacterium intracellulare
GCA_002285675.1		2	SAMN07528789	FLAC0181	Mycobacterium intracellulare
GCA_030342225.1	JATAAC000000000		SAMN35656213	FLAC0472	Mycobacterium marseillense
GCA_002285715.1		2	SAMN07528776	FLAC0026	Mycobacterium marseillense
GCA_030342165.1	JASZZZ000000000		SAMN35656218	FLAC0960	Mycobacterium sp. FLAC0960
GCA_030342155.1	JATAAA000000000		SAMN35656216	FLAC0711b	Mycobacteroides abscessus
GCA_030342185.1	JATAAB000000000		SAMN35656215	FLAC0711a	Mycobacteroides abscessus
GCA_030342245.1	JATAAD000000000		SAMN35656212	FLAC0253b	Mycobacteroides abscessus
GCA_030341955.1	JASZZP000000000		SAMN35656232	FLAC1627	Mycobacteroides abscessus
GCA_030341945.1	JASZZO000000000		SAMN35656233	FLAC1554	Mycobacteroides abscessus
GCA_030342105.1	JASZZW000000000		SAMN35656221	FLAC1090	Mycobacteroides abscessus
GCA_030342085.1	JASZZV000000000		SAMN35656225	FLAC1238	Mycobacteroides abscessus
GCA_030342065.1	JASZZT000000000		SAMN35656227	FLAC1243	Mycobacteroides abscessus
GCA_030342045.1	JASZZU000000000		SAMN35656226	FLAC1242	Mycobacteroides abscessus
GCA_030342025.1	JASZZS000000000		SAMN35656228	FLAC1244	Mycobacteroides abscessus
GCA_030342325.1	JATAAE000000000		SAMN35656211	FLAC0253a	Mycobacteroides abscessus
GCA_002140035.1		1	SAMN06859124	FLAC047	Mycobacteroides abscessus subsp. massiliense
GCA_002142835.1	NEGS00000000		SAMN06806045	FLAC050	Mycobacteroides abscessus
GCA_002142915.1	NEGW00000000		SAMN06806041	FLAC012	Mycobacteroides abscessus
GCA_002142785.1	NEGR00000000		SAMN06806046	FLAC051	Mycobacteroides abscessus
GCA_002142865.1	NEGV00000000		SAMN06806042	FLAC014	Mycobacteroides abscessus
GCA_002142855.1	NEGT00000000		SAMN06806044	FLAC040	Mycobacteroides abscessus
GCA_002142845.1	NEGU00000000		SAMN06806043	FLAC015	Mycobacteroides abscessus
GCA_002142775.1	NEGP00000000		SAMN06806048	FLAC053	Mycobacteroides abscessus
GCA_002142765.1	NEGO00000000		SAMN06806049	FLAC078	Mycobacteroides abscessus
GCA_002142755.1	NEGQ00000000		SAMN06806047	FLAC052	Mycobacteroides abscessus
GCA_001677095.1		1	SAMN05244437	FLAC006	Mycobacteroides abscessus
GCA_001677215.1		1	SAMN05244442	FLAC055	Mycobacteroides abscessus
GCA_001677195.1		1	SAMN05244441	FLAC046	Mycobacteroides abscessus
GCA_001677175.1		1	SAMN05244440	FLAC030	Mycobacteroides abscessus
GCA_001677155.1		1	SAMN05244439	FLAC028	Mycobacteroides abscessus
GCA_001606195.1		1	SAMN04572933	FLAC003	Mycobacteroides abscessus
GCA_001606315.1		1	SAMN04572939	FLAC029	Mycobacteroides abscessus
GCA_001606295.1		1	SAMN04572938	FLAC013	Mycobacteroides abscessus
GCA_001606235.1		1	SAMN04572935	FLAC005	Mycobacteroides abscessus
GCA_001606215.1		1	SAMN04572934	FLAC004	Mycobacteroides abscessus
GCA_001606275.1		1	SAMN04572937	FLAC008	Mycobacteroides abscessus
GCA_001606255.1		1	SAMN04572936	FLAC007	Mycobacteroides abscessus
GCA_001606335.1		1	SAMN04572940	FLAC031	Mycobacteroides abscessus
GCA_001610635.1		1	SAMN04572942	FLAC048	Mycobacteroides abscessus
GCA_001610615.1		1	SAMN04572941	FLAC045	Mycobacteroides abscessus
GCA_001610675.1		1	SAMN04572944	FLAC054	Mycobacteroides abscessus
GCA_001610655.1		1	SAMN04572943	FLAC049	Mycobacteroides abscessus
GCA_036633445.1	JAMDFQ000000000		SAMN28175860	NTM0295	Mycobacteroides abscessus
GCA_036633355.1	JAMDFP000000000		SAMN28175861	NTM0635	Mycobacteroides abscessus
GCA_001677135.1		1	SAMN05244438	FLAC016	Mycobacteroides immunogenum

SRA Data Details

Parameter	Value
Data volume, Gbases	133
Data volume, Mbytes	54545

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Mycobacterium

Mycobacterium abscessus complex genome sequencing

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