Multiple species (ID 307517) - BioProject

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Accession: PRJNA307517 ID: 307517

Multiple species

Multiple species Genome sequencing and assembly

This project aims to sequence, assemble and annotate the genomes of multidrug resistant pathogens.

Accession	PRJNA307517
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Pitt ME et al., "Multifactorial chromosomal variants regulate polymyxin resistance in extensively drug-resistant Klebsiella pneumoniae.", Microb Genom, 2018 Mar;4(3) Elliott AG et al., "Complete Genome Sequence of Klebsiella quasipneumoniae subsp. similipneumoniae Strain ATCC 700603.", Genome Announc, 2016 May 26;4(3)
Submission	Registration date: 3-Jan-2016 The Unniversity of Queensland
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	2840
WGS master	20
Genomic DNA	26
SRA Experiments	40
Protein Sequences	141342
Publications
PubMed	2
PMC	2
Other datasets
BioSample	25
Assembly	25
Supplementary data
Base modification	1

Assembly details:

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Assembly level

Number of Assemblies

Complete genome

Contig

Total

5
20
25

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_001701845.2		5	SAMN04868740	20_GR_12	Klebsiella pneumoniae
GCA_001701835.2		6	SAMN04868736	16_GR_13	Klebsiella pneumoniae
GCA_001701425.2		6	SAMN04868721	1_GR_13	Klebsiella pneumoniae
GCA_001702045.2		6	SAMN04868722	2_GR_12	Klebsiella pneumoniae
GCA_001701815.1	LXMP00000000		SAMN04868734	14_GR_14	Klebsiella pneumoniae
GCA_001702035.1	LXMZ00000000		SAMN04868724	4_GR_12	Klebsiella pneumoniae
GCA_001702005.1	LXNA00000000		SAMN04868723	3_GR_13	Klebsiella pneumoniae
GCA_001701985.1	LXMY00000000		SAMN04868725	5_GR_13	Klebsiella pneumoniae
GCA_001701975.1	LXMT00000000		SAMN04868730	10_GR_13	Klebsiella pneumoniae
GCA_001701925.1	LXMU00000000		SAMN04868729	9_GR_12	Klebsiella pneumoniae
GCA_001701935.1	LXMX00000000		SAMN04868726	6_GR_12	Klebsiella pneumoniae
GCA_001701915.1	LXMS00000000		SAMN04868731	11_BR_13	Klebsiella pneumoniae
GCA_001701895.1	LXMR00000000		SAMN04868732	12_BR_13	Klebsiella pneumoniae
GCA_001701445.1	LXMW00000000		SAMN04868727	7_GR_13	Klebsiella pneumoniae
GCA_001701415.1	LXMF00000000		SAMN04868744	24_GR_13	Klebsiella pneumoniae
GCA_001701395.1	LXMH00000000		SAMN04868742	22_GR_12	Klebsiella pneumoniae
GCA_001701355.1	LXMK00000000		SAMN04868739	19_GR_14	Klebsiella pneumoniae
GCA_001701365.1	LXMQ00000000		SAMN04868733	13_GR_14	Klebsiella pneumoniae
GCA_001701475.1	LXMO00000000		SAMN04868735	15_GR_13	Klebsiella pneumoniae
GCA_001701555.1	LXMG00000000		SAMN04868743	23_GR_12	Klebsiella pneumoniae
GCA_001701525.1	LXML00000000		SAMN04868738	18_GR_14	Klebsiella pneumoniae
GCA_001701505.1	LXMV00000000		SAMN04868728	8_GR_13	Klebsiella pneumoniae
GCA_001701495.1	LXMM00000000		SAMN04868737	17_GR_14	Klebsiella pneumoniae
GCA_001596075.2		3	SAMN04382091	ATCC 700603	Klebsiella quasipneumoniae
GCA_001701875.1	LXMI00000000		SAMN04868741	21_GR_13	Klebsiella quasipneumoniae

SRA Data Details

Parameter	Value
Data volume, Gbases	41
Data volume, Mbytes	23985

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Multiple species

Multiple species Genome sequencing and assembly

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