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Accession: PRJNA294310 ID: 294310

soil metagenome

Soils Metagenome

Shotgun-cloned metagenomic libraries from 16 soils (9 grassland, 7 agricultural) were each expressed in E. More...
AccessionPRJNA294310
Data TypeMetagenome
ScopeEnvironment
Organismsoil metagenome[Taxonomy ID: 410658]
unclassified sequences; metagenomes; ecological metagenomes; soil metagenome
PublicationsForsberg KJ et al., "Identification of Genes Conferring Tolerance to Lignocellulose-Derived Inhibitors by Functional Selections in Soil Metagenomes.", Appl Environ Microbiol, 2016 Jan 15;82(2):528-37
Grants
  • "BARD1 Regulation of Polyadenylation During Transcription-Coupled DNA Repair" (Grant ID DGE-1143954, National Science Foundation Graduate Research Fellowship Program)
  • "Functional metagenomic discovery of novel enzymatic functions from ultra low-volume samples with whole metagenome amplification" (Grant ID Synthetic Biology - SB2, National Academies Keck Futures Initiatives)
  • "TRAINING PROGRAM IN CELLULAR AND MOLECULAR BIOLOGY" (Grant ID T32 GM007067, NIH National Institute of General Medical Sciences)
  • "METAGENOMIC ENGINEERING OF PROBIOTIC BACTERIA TO IMPROVE INTESTINAL COLONIZATION" (Grant ID DP2 DK098089, NIH National Institute of Diabetes and Digestive and Kidney Diseases)
  • "INSTITUTIONAL TRAINING GRANT IN GENOMIC SCIENCE" (Grant ID T32 HG000045, NIH National Human Genome Research Institute)
  • "A Synthetic Metagenomic Approach for Capturing Multigenic Biomass Conversion Machinery from Complex Microbial Communities" (Grant ID 2011-Dantas, International Center for Advanced Renewable Energy and Sustainability at Washington University)
  • "Functional Characterization of Antibiotic Resistance Reservoirs in Development Pediatric Microbiomes" (Grant ID MD-II-2011-117, Children's Discovery Institute)
SubmissionRegistration date: 31-Aug-2015
Washington University School of Medicine
RelevanceIndustrial
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (Genomic DNA)1932
Protein Sequences3712
Publications
PubMed1
PMC1
Other datasets
BioSample16

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