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Accession: PRJNA305421 ID: 305421

Calidris pugnax isolate:Ruff (ruff)

Calidris pugnax isolate:Ruff RefSeq Genome sequencing and assembly

The reference sequence (RefSeq) genome assembly is derived from the submitted GenBank assembly (see linked project PRJNA281024). Annotation provided on the RefSeq genomic records is based on NCBI annotation pipeline.
AccessionPRJNA305421
Data TypeRefSeq Genome sequencing and assembly
ScopeMonoisolate
OrganismCalidris pugnax[Taxonomy ID: 198806]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Scolopacidae; Calidris; Calidris pugnax
PublicationsLowe TM et al., "tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.", Nucleic Acids Res, 1997 Mar 1;25(5):955-64
SubmissionRegistration date: 4-Nov-2015
BGI
RelevanceEvolution
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)38009
Transcript34256
Protein Sequences30889
Publications
PubMed1
PMC1
Other datasets
BioSample1
Assembly1
Assembly details:
AssemblyLevelWGSBioSampleTaxonomy
GCF_001431845.1ScaffoldLDEH00000000SAMN03491621
Calidris pugnax
Related GenBank Project
PRJNA281024 : Calidris pugnax isolate:Ruff Genome sequencing and assembly

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