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Links from Nucleotide

Accession: PRJNA296464 ID: 296464

Gammaproteobacteria

Carbapenem-non-susceptible Bacteria Recovered from the Faeces of Dairy Cattle

The objective of this project was to explore the potential for carbapenem resistance in bacteria recovered from the faeces of dairy cattle. More...
AccessionPRJNA296464
Data TypeGenome sequencing and assembly
ScopeMultispecies
OrganismGammaproteobacteria[Taxonomy ID: 1236]
Bacteria; Pseudomonadota; Gammaproteobacteria
PublicationsWebb HE et al., "Carbapenem-Resistant Bacteria Recovered from Faeces of Dairy Cattle in the High Plains Region of the USA.", PLoS One, 2016;11(1):e0147363
SubmissionRegistration date: 19-Nov-2015
Texas Tech University
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)2261
WGS master28
Protein Sequences117499
Publications
PubMed1
PMC1
Other datasets
BioSample28
Assembly28
Assembly details:
Assembly levelNumber of Assemblies
6
22
28
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_001446715.1ContigLKJZ00000000SAMN04099660
TTU2014-131AME
GCA_001446895.1ContigLKKI00000000SAMN04099669
TTU2014-159ASC
GCA_001446875.1ContigLKKH00000000SAMN04099668
TTU2014-143ASC
GCA_001446855.1ContigLKKG00000000SAMN04099667
TTU2014-143AME
GCA_001446795.1ScaffoldLKKD00000000SAMN04099664
TTU2014-141AME
GCA_001446775.1ContigLKKC00000000SAMN04099663
TTU2014-140ASC
GCA_001446755.1ContigLKKB00000000SAMN04099662
TTU2014-134ASC
GCA_001446735.1ContigLKKA00000000SAMN04099661
TTU2014-134AME
GCA_001446695.1ContigLKJY00000000SAMN04099659
TTU2014-131ASC
GCA_001446675.1ScaffoldLKJX00000000SAMN04099658
TTU2014-130ASC
GCA_001446645.1ContigLKJW00000000SAMN04099657
TTU2014-130AME
GCA_001446635.1ContigLKJV00000000SAMN04099656
TTU2014-125ASC
GCA_001446575.1ContigLKJS00000000SAMN04099653
TTU2014-115ASC
GCA_001446555.1ScaffoldLKJR00000000SAMN04099652
TTU2014-115AME
GCA_001446535.1ScaffoldLKJQ00000000SAMN04099651
TTU2014-113AME
GCA_001446505.1ContigLKJP00000000SAMN04099650
TTU2014-108ASC
GCA_001446835.1ContigLKKF00000000SAMN04099666
TTU2014-142ASC
GCA_001446815.1ContigLKKE00000000SAMN04099665
TTU2014-141ASC
GCA_001446465.1ContigLKJN00000000SAMN04099649
TTU2014-108AME
GCA_001446615.1ContigLKJU00000000SAMN04099655
TTU2014-121AME
GCA_001446595.1ContigLKJT00000000SAMN04099654
TTU2014-120BME
GCA_001446455.1ScaffoldLKJM00000000SAMN04099627
TTU2014-148AME
GCA_001446995.1ScaffoldLKKN00000000SAMN04099648
TTU2014-011ASC
GCA_001446495.1ContigLKJO00000000SAMN04099647
TTU2014-008ASC
GCA_001446915.1ContigLKKJ00000000SAMN04099671
TTU2014-066ASC
GCA_001446935.1ContigLKKK00000000SAMN04099672
TTU2014-080ASC
GCA_001446945.1ContigLKKL00000000SAMN04099673
TTU2014-096BSC
GCA_001446975.1ContigLKKM00000000SAMN04099674
TTU2014-105ASC

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