Gammaproteobacteria (ID 296464) - BioProject

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Accession: PRJNA296464 ID: 296464

Gammaproteobacteria

Carbapenem-non-susceptible Bacteria Recovered from the Faeces of Dairy Cattle

The objective of this project was to explore the potential for carbapenem resistance in bacteria recovered from the faeces of dairy cattle. More...

Accession	PRJNA296464
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Gammaproteobacteria[Taxonomy ID: 1236] Bacteria; Pseudomonadota; Gammaproteobacteria
Publications	Webb HE et al., "Carbapenem-Resistant Bacteria Recovered from Faeces of Dairy Cattle in the High Plains Region of the USA.", PLoS One, 2016;11(1):e0147363
Submission	Registration date: 19-Nov-2015 Texas Tech University
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	2261
WGS master	28
Protein Sequences	117499
Publications
PubMed	1
PMC	1
Other datasets
BioSample	28
Assembly	28

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

6
22
28

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_001446715.1	LKJZ00000000	SAMN04099660	TTU2014-131AME	Acinetobacter baumannii
GCA_001446895.1	LKKI00000000	SAMN04099669	TTU2014-159ASC	Aeromonas allosaccharophila
GCA_001446875.1	LKKH00000000	SAMN04099668	TTU2014-143ASC	Aeromonas veronii
GCA_001446855.1	LKKG00000000	SAMN04099667	TTU2014-143AME	Aeromonas veronii
GCA_001446835.1	LKKF00000000	SAMN04099666	TTU2014-142ASC	Aeromonas veronii
GCA_001446815.1	LKKE00000000	SAMN04099665	TTU2014-141ASC	Aeromonas veronii
GCA_001446795.1	LKKD00000000	SAMN04099664	TTU2014-141AME	Aeromonas veronii
GCA_001446775.1	LKKC00000000	SAMN04099663	TTU2014-140ASC	Aeromonas veronii
GCA_001446755.1	LKKB00000000	SAMN04099662	TTU2014-134ASC	Aeromonas veronii
GCA_001446735.1	LKKA00000000	SAMN04099661	TTU2014-134AME	Aeromonas veronii
GCA_001446695.1	LKJY00000000	SAMN04099659	TTU2014-131ASC	Aeromonas veronii
GCA_001446675.1	LKJX00000000	SAMN04099658	TTU2014-130ASC	Aeromonas veronii
GCA_001446645.1	LKJW00000000	SAMN04099657	TTU2014-130AME	Aeromonas veronii
GCA_001446635.1	LKJV00000000	SAMN04099656	TTU2014-125ASC	Aeromonas veronii
GCA_001446575.1	LKJS00000000	SAMN04099653	TTU2014-115ASC	Aeromonas veronii
GCA_001446555.1	LKJR00000000	SAMN04099652	TTU2014-115AME	Aeromonas veronii
GCA_001446535.1	LKJQ00000000	SAMN04099651	TTU2014-113AME	Aeromonas veronii
GCA_001446505.1	LKJP00000000	SAMN04099650	TTU2014-108ASC	Aeromonas veronii
GCA_001446465.1	LKJN00000000	SAMN04099649	TTU2014-108AME	Aeromonas veronii
GCA_001446615.1	LKJU00000000	SAMN04099655	TTU2014-121AME	Escherichia coli
GCA_001446595.1	LKJT00000000	SAMN04099654	TTU2014-120BME	Escherichia coli
GCA_001446455.1	LKJM00000000	SAMN04099627	TTU2014-148AME	Escherichia coli
GCA_001446995.1	LKKN00000000	SAMN04099648	TTU2014-011ASC	Pseudomonas citronellolis
GCA_001446495.1	LKJO00000000	SAMN04099647	TTU2014-008ASC	Pseudomonas citronellolis
GCA_001446915.1	LKKJ00000000	SAMN04099671	TTU2014-066ASC	Pseudomonas sp. TTU2014-066ASC
GCA_001446935.1	LKKK00000000	SAMN04099672	TTU2014-080ASC	Pseudomonas sp. TTU2014-080ASC
GCA_001446945.1	LKKL00000000	SAMN04099673	TTU2014-096BSC	Pseudomonas sp. TTU2014-096BSC
GCA_001446975.1	LKKM00000000	SAMN04099674	TTU2014-105ASC	Pseudomonas sp. TTU2014-105ASC

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Gammaproteobacteria

Carbapenem-non-susceptible Bacteria Recovered from the Faeces of Dairy Cattle

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